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SCNpilot_cont_500_bf_scaffold_7604_12

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(11426..11737)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 103.0
  • Bit_score: 191
  • Evalue 1.70e-46
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 103.0
  • Bit_score: 191
  • Evalue 7.40e-46
3-isopropylmalate dehydratase small subunit n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFF8_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 103.0
  • Bit_score: 191
  • Evalue 5.30e-46

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATCTCGACCTCGTTCGGCGACATCTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCGATCCGCGTCTCGCAGGACGATCTCGACAAGCTGTTCGACGACGCCGAACGCGGCGCGAATTCGACGCTGACCGTCGACCTCGCCAATCAGGAAATCCGTGGGCCGGACGGCGGCAAGGTCAAGTTCGAGATCGACCCGTTCCGCAAGCACTGTCTGCTCAACGGCCTCGACGACATCGGCCTGACCATGGAGAAGAAGGCTTCAATCACCAGCTACGAGGCGAAGGCTCACGAAGCCCGGCCTTGGGCGTGA
PROTEIN sequence
Length: 104
ISTSFGDIFYNNCFKNGILPIRVSQDDLDKLFDDAERGANSTLTVDLANQEIRGPDGGKVKFEIDPFRKHCLLNGLDDIGLTMEKKASITSYEAKAHEARPWA*