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SCNpilot_cont_500_bf_scaffold_8001_4

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(3192..4391)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214T6_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 400.0
  • Bit_score: 577
  • Evalue 1.30e-161
amino acid ABC transporter permease; K09970 general L-amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 400.0
  • Bit_score: 577
  • Evalue 4.10e-162
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABD07613.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 400.0
  • Bit_score: 577
  • Evalue 1.80e-161

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGCGTCGGAAGCCCGCAAAGCGCCCCTCCAGTTCGGCATCAAGCTGCGCCGCACGCTATGCGGCCGGGCCGGGNNCCTGGTTCTGCAACTGCTGTTCGCCGCGCTGATCGTCTGGCTCGGATACGAGATCTACGCGAACGCGACGACGAACCTGCAAAACCAGAGGGTCGCATCCGGATTTGGCTTCCTGTCGCAGACGGCGGGCTTTGGCGTCAGCCAGAGCCTGATCCCCTACAGCGAGTCGGACAGCTACGCGCGGGTGTTTCTGGTCGGCCTCGTCAACACGCTGGTGGTGGCGGCCGTCGGCATTGTCTTCGCCACGCTGATCGGGTTCGCGGTCGGCATCGGCCGGCTGTCGCGCAACTGGCTGGTGGCGCGCATCAGCGGCGGCTATGTGGAGTTGATCCGCAATCTGCCGCTGCTGTTCCAGATTCTGTTCTGGTATCTCGCGGTGCTCGGCGCGCTGCCGGGGCCACGTCAGAGCATTTCGTTGTTCGACGAGATTTTCATCAGCAACCGCGGTCTGGTGCTTCCGAGGCCGATCCCGCATGACGGGCTGACCGTGTTTCTCGCCGCCATCGCCGGGGCGGCGGTGGCGGCGTTGGGGTTGCGCGGCTATGCCCGCCGCCGCCTGTTCCGTGAGGGGCGGCCGCTGACGATCTGGCCTTACGTCCTCGCGCTTTTGATCGGATTGCCGATGCTCGCGGTGCTGGCGTTCGGAACGCCGTTCTCGATCGAGGTGCCGCGCTTGCGGGGATTCAATTTCGCCGGCGGGCTGCGCGTAGTGCCGGAATTCGTGGCGCTGGCACTGGCGCTGTCCACCTACACCGCGGCCTTCATCGCCGAAAACGTCCGCGCCGGCATTCAGTCGGTGTCGCGCGGCCAGATGGAGGCCGGCGAATCGCTCGGCCTCTCGCACGGCGCCACCCTGCGCTTGATCGTGGTGCCGCAGGCCATGCGCGTGATCCTGCCGCCGCTGACCAATCAGTACCTGAACCTGACCAAGAACTCGTCGCTGGCGGTGGCCATTGGCTATCCCGACCTGTTCTCGGTCTTTGCCGGCACGACGCTGAGCCAGACCGGGCAGGCGATCGAAATTATCGCCATCACCATGGGCGTCTATTTGCTGATCTCCGTTGTGACCAGCGTGGCGATGGGACTGTACGGACGACGGGTCAACCGGAGCCTCGGCCGATGA
PROTEIN sequence
Length: 400
MASEARKAPLQFGIKLRRTLCGRAGXLVLQLLFAALIVWLGYEIYANATTNLQNQRVASGFGFLSQTAGFGVSQSLIPYSESDSYARVFLVGLVNTLVVAAVGIVFATLIGFAVGIGRLSRNWLVARISGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSISLFDEIFISNRGLVLPRPIPHDGLTVFLAAIAGAAVAALGLRGYARRRLFREGRPLTIWPYVLALLIGLPMLAVLAFGTPFSIEVPRLRGFNFAGGLRVVPEFVALALALSTYTAAFIAENVRAGIQSVSRGQMEAGESLGLSHGATLRLIVVPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEIIAITMGVYLLISVVTSVAMGLYGRRVNRSLGR*