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SCNpilot_cont_500_bf_scaffold_8001

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8001_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..866
DNA (864bp) protein (288aa)
cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
O-acetylserine (Thiol) lyase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N6P6_RHOPA
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ACF01345.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_8001_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(847..1599)
DNA (753bp) protein (251aa)
ABC transporter; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Afipia birgiae RepID=UPI0002FDA753
General L-amino acid transport ATP-binding protein AapP {ECO:0000313|EMBL:EKS39992.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_8001_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1672..3195)
DNA (1524bp) protein (508aa)
Amino acid ABC transporter membrane protein 2, PAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLN1_NITHX
amino acid ABC transporter permease; K09971 general L-amino acid transport system permease protein
Amino acid ABC transporter membrane protein 2, PAAT family {ECO:0000313|EMBL:ABE62866.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_8001_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3192..4391)
DNA (1200bp) protein (400aa)
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214T6_RHOPB
amino acid ABC transporter permease; K09970 general L-amino acid transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABD07613.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_500_bf_scaffold_8001_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4410..5426)
DNA (1017bp) protein (339aa)
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214T7_RHOPB
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ34081.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
lysine-arginine-ornithine-binding periplasmic protein; K09969 general L-amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_8001_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5749..6957
DNA (1209bp) protein (403aa)
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase {ECO:0000313|EMBL:ABD07615.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ABD07615.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Cystathionine beta-lyase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVZ5_RHOP2
SCNpilot_cont_500_bf_scaffold_8001_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7003..7329)
DNA (327bp) protein (109aa)
Lipid A biosynthesis n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSE9_NITWN
lipid A biosynthesis
Lipid A biosynthesis {ECO:0000313|EMBL:ABA04792.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_8001_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7322..8074)
DNA (753bp) protein (251aa)
Glycosyl transferase, family 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLM5_NITHX
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABE62872.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_8001_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8122..8994)
DNA (873bp) protein (291aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QHY8_RHOPT rbh
PA-phosphatase-like phosphoesterase rbh
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ACF01335.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_8001_10
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8996..9562)
DNA (567bp) protein (189aa)
Putative glycosyl transferase, family 39 membrane protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TBT6_9BRAD
glycosyl transferase family protein
Putative glycosyl transferase, family 39 membrane protein {ECO:0000313|EMBL:CCE03913.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Displaying 10 items

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