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SCNpilot_cont_500_bf_scaffold_9275_9

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(6888..7115)

Top 3 Functional Annotations

Value Algorithm Source
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 64.0
  • Bit_score: 99
  • Evalue 3.70e-19
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 64.0
  • Bit_score: 99
  • Evalue 1.60e-18
Shikimate kinase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2R4_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 64.0
  • Bit_score: 99
  • Evalue 1.20e-18

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
GTGAAGCGACGCTCCGACCGGCCGCTGCTGCAAACCGCCGATCCGGCCGCCACCATCGCGCGCCTGATCGCCGAACGCGGCCCGAACTATCGACTGGCCGACATCACCATCGCTTCGCGCGAAGTCCCGCACGAGAAGATCGTCGACGAATGCCTCGCGGCGCTTCACGGCCGACTGTGCGACACCGATGCCGCCGGCCACCCCTCGCATCAGGATCGAATTCAATGA
PROTEIN sequence
Length: 76
VKRRSDRPLLQTADPAATIARLIAERGPNYRLADITIASREVPHEKIVDECLAALHGRLCDTDAAGHPSHQDRIQ*