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SCNpilot_cont_500_bf_scaffold_9275

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9275_1
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..854
DNA (852bp) protein (284aa)
Protein translocase subunit SecA n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXF1_9BRAD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
azi, div; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_cont_500_bf_scaffold_9275_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(902..1822)
DNA (921bp) protein (307aa)
alpha/beta hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036478D7
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51617.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hydrolase
SCNpilot_cont_500_bf_scaffold_9275_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2020..2406
DNA (387bp) protein (129aa)
Tryptophan-rich sensory protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1INP0_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51618.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9275_4
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2403..3491
DNA (1089bp) protein (363aa)
poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Blr2885 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89R87_BRADU
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:EJZ32749.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_500_bf_scaffold_9275_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3488..4087
DNA (600bp) protein (200aa)
Blr2886 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89R86_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ68433.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_500_bf_scaffold_9275_6
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4451..5140)
DNA (690bp) protein (230aa)
membrane protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000366E93D
Putative Mg2+ and Co2+ transporter CorB {ECO:0000313|EMBL:EHR00065.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9275_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5116..5715)
DNA (600bp) protein (200aa)
Mg2+ and Co2+ transporter CorB family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVM7_NITWN
Mg2+ and Co2+ transporter CorB family
Mg2+ and Co2+ transporter CorB family {ECO:0000313|EMBL:ABA03664.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_9275_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5740..6891)
DNA (1152bp) protein (384aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] rbh
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
3-dehydroquinate synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EF8_RHOPS rbh
SCNpilot_cont_500_bf_scaffold_9275_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6888..7115)
DNA (228bp) protein (76aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Shikimate kinase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2R4_RHOP2
SCNpilot_cont_500_bf_scaffold_9275_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7112..7516)
DNA (405bp) protein (135aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGH9_9BRAD
SCNpilot_cont_500_bf_scaffold_9275_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7666..7812
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BY0_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86106.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_9275_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7855..8832
DNA (978bp) protein (326aa)
tyrosine recombinase XerD n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037E5FD5
tyrosine recombinase XerD; K04763 integrase/recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_9275_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9061..9825
DNA (765bp) protein (255aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudom
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EF4_RHOPS
Displaying 13 items

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