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SCNpilot_cont_500_bf_scaffold_9336

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9336_1
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1103)
DNA (1101bp) protein (367aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10 2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003480344
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_500_bf_scaffold_9336_2
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1247..1480)
DNA (234bp) protein (78aa)
DNA-binding protein Fis n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X9D8_9BURK
Fis family transcriptional regulator {ECO:0000313|EMBL:AJE97782.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
DNA-binding protein Fis; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein
SCNpilot_cont_500_bf_scaffold_9336_3
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1477..2505)
DNA (1029bp) protein (343aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
nifR3 family TIM-barrel protein; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase B n=2 Tax=Pandoraea RepID=V5UCJ5_9BURK rbh
SCNpilot_cont_500_bf_scaffold_9336_4
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2614..3948)
DNA (1335bp) protein (445aa)
ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase (EC:1.14.13.-); K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A26D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EON15497.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_500_bf_scaffold_9336_5
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3948..4568)
DNA (621bp) protein (207aa)
pepP; proline aminopeptidase p ii (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1D7B
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KHQ97562.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_500_bf_scaffold_9336_6
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..5218)
DNA (705bp) protein (235aa)
pepP; X-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1D7B
Aminopeptidase {ECO:0000313|EMBL:EON15498.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_500_bf_scaffold_9336_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5261..6010)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345EEDD rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KHQ92980.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) rbh
SCNpilot_cont_500_bf_scaffold_9336_8
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6021..7106)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DD80E rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AJF00768.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
phosphotransferase enzyme family protein; K07102 rbh
SCNpilot_cont_500_bf_scaffold_9336_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7216..8241
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036D7895 rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
organic solvent tolerance protein; K04744 LPS-assembly protein
SCNpilot_cont_500_bf_scaffold_9336_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8269..8850
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036D7895
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
imp; envelope biosynthesis and integrity protein; K04744 LPS-assembly protein
Displaying 10 items

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