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SCNpilot_cont_500_bf_scaffold_9392

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9392_1
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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62..670
DNA (609bp) protein (203aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:AJE97435.1}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034857F6 rbh
SCNpilot_cont_500_bf_scaffold_9392_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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667..2136
DNA (1470bp) protein (490aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] rbh
Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p, tRNA and rRNA cytosine-C5-methylase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZ33_9BURK rbh
Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p, tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:EON12501.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_500_bf_scaffold_9392_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2183..3577
DNA (1395bp) protein (465aa)
Mechanosensitive ion channel protein MscS n=2 Tax=Pandoraea RepID=V5UCC1_9BURK rbh
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:AHB04730.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
small-conductance mechanosensitive channel protein rbh
SCNpilot_cont_500_bf_scaffold_9392_4
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3890..4411
DNA (522bp) protein (174aa)
aminotransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DA03C
Aminotransferase {ECO:0000313|EMBL:AJC19720.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
fatty acid desaturase
SCNpilot_cont_500_bf_scaffold_9392_5
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4503..4946
DNA (444bp) protein (148aa)
aminotransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DA03C
Aminotransferase {ECO:0000313|EMBL:AJC19720.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
fatty acid desaturase family protein
SCNpilot_cont_500_bf_scaffold_9392_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5006..6139
DNA (1134bp) protein (378aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00012209}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00096027};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
nadA; quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72] rbh
Quinolinate synthase A n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZ51_9BURK rbh
SCNpilot_cont_500_bf_scaffold_9392_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6136..7041
DNA (906bp) protein (302aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:AJE97432.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AJE97432.1};; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B4AF3 rbh
SCNpilot_cont_500_bf_scaffold_9392_8
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7145..8749)
DNA (1605bp) protein (535aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
nadB; L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] rbh
L-aspartate oxidase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZ28_9BURK rbh
SCNpilot_cont_500_bf_scaffold_9392_9
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8992..9159)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CE995
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
rpmG; ribosomal protein L33
SCNpilot_cont_500_bf_scaffold_9392_10
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9176..9409)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037B1F5D
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373, ECO:0000313|EMBL:AJE97429.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
rpmB; ribosomal protein L28
Displaying 10 items

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