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SCNpilot_cont_500_bf_scaffold_9923

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9923_1
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..562
DNA (561bp) protein (187aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea ve
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
amidophosphoribosyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003468842
SCNpilot_cont_500_bf_scaffold_9923_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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788..2032
DNA (1245bp) protein (415aa)
O-succinylhomoserine sulfhydrylase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348BB1D rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EON12117.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase rbh
SCNpilot_cont_500_bf_scaffold_9923_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2047..3117
DNA (1071bp) protein (357aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:AJE99483.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000256|SAAS:SAAS00083672};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BA6CE rbh
SCNpilot_cont_500_bf_scaffold_9923_4
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3354..4787
DNA (1434bp) protein (478aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003827FC2 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:AJF01102.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_500_bf_scaffold_9923_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4854..5633)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003457C95 rbh
Membrane-associated, metal-dependent hydrolase {ECO:0000313|EMBL:EON12113.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
membrane-associated, metal-dependent hydrolase rbh
SCNpilot_cont_500_bf_scaffold_9923_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6679..7455)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345D287 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHQ99827.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_9923_7
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7679..8128
DNA (450bp) protein (150aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003652868
glutamyl-tRNA synthetase
SCNpilot_cont_500_bf_scaffold_9923_8
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7975..8640)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JQY9_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA50599.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_cont_500_bf_scaffold_9923_9
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8657..8947
DNA (291bp) protein (97aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003652868
glutamyl-tRNA synthetase
SCNpilot_cont_500_bf_scaffold_9923_10
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9079..9945)
DNA (867bp) protein (289aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003449963 rbh
Inositol monophosphatase {ECO:0000313|EMBL:KHQ99004.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_500_bf_scaffold_9923_11
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10378..10587
DNA (210bp) protein (70aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
TrmH family RNA methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
RNA methyltransferase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UKL3_9BURK
Displaying 11 items

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