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SCNpilot_cont_500_bf_scaffold_10030

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10030_1
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(47..715)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1461 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC69048.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
hypothetical protein; K09921 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_10030_2
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(884..1447)
DNA (564bp) protein (188aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034701E0
SCNpilot_cont_500_bf_scaffold_10030_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1723..2619)
DNA (897bp) protein (299aa)
lipid A biosynthesis lauroyl acyltransferase (EC:2.3.1.-); K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AD7E0 rbh
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:KHQ97621.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_500_bf_scaffold_10030_4
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2808..3932
DNA (1125bp) protein (375aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DC916 rbh
SCNpilot_cont_500_bf_scaffold_10030_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4061..5539)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003476826 rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
NAD-dependent aldehyde dehydrogenase
SCNpilot_cont_500_bf_scaffold_10030_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5610..7274)
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B29CB rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KHQ97802.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
acyl-CoA dehydrogenase; K09456 putative acyl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_10030_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7778..9178
DNA (1401bp) protein (467aa)
GMC family oxidoreductase; K00119 [EC:1.1.99.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003466060 rbh
GMC family oxidoreductase {ECO:0000313|EMBL:KHQ97618.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_500_bf_scaffold_10030_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9149..9622)
DNA (474bp) protein (158aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035C7C0E rbh
SCNpilot_cont_500_bf_scaffold_10030_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9564..11009)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344D61C rbh
Uncharacterized protein {ECO:0000313|EMBL:KHQ97800.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Type II secretion system F domain protein
Displaying 9 items

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