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SCNpilot_cont_500_bf_scaffold_8149

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8149_1
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..241)
DNA (240bp) protein (80aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
dnaN; dna polymerase III (beta chain) protein; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=1 Tax=Pandoraea sp. RB-44 RepID=V5UF47_9BURK
SCNpilot_cont_500_bf_scaffold_8149_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(482..2014)
DNA (1533bp) protein (511aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X094_9BURK rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
Chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein rbh
SCNpilot_cont_500_bf_scaffold_8149_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2832..2966
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=3 Tax=Pandoraea RepID=V5UEC5_9BURK
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
rpmH; 50S ribosomal protein L34
SCNpilot_cont_500_bf_scaffold_8149_4
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3028..3534
DNA (507bp) protein (169aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
ribonuclease P; K03536 ribonuclease P protein component [EC:3.1.26.5]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036271AB
SCNpilot_cont_500_bf_scaffold_8149_5
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4150..4779
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B351C
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
yidC; putative inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
SCNpilot_cont_500_bf_scaffold_8149_6
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4746..5432
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B351C
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
putative inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
SCNpilot_cont_500_bf_scaffold_8149_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6136..6870
DNA (735bp) protein (245aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
tRNA modification GTPase TrmE n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349CD20
GTPase and tRNA-U34 5-formylation enzyme TrmE
SCNpilot_cont_500_bf_scaffold_8149_8
unknown

Not on your lists

7026..7217
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C556F
SCNpilot_cont_500_bf_scaffold_8149_9
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7366..7722
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003493AB4
Uncharacterized protein {ECO:0000313|EMBL:AJP60109.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8149_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8114..8305
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AACA6
Uncharacterized protein {ECO:0000313|EMBL:EON12866.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8149_11
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8386..8769
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DAEFB
Uncharacterized protein {ECO:0000313|EMBL:AJE98276.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_500_bf_scaffold_8149_12
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8927..9511
DNA (585bp) protein (195aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
ligT; 2'-5' RNA ligase (EC:6.5.1.-); K01975 2'-5' RNA ligase [EC:6.5.1.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349A9D8 rbh
SCNpilot_cont_500_bf_scaffold_8149_13
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9569..9784
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D47FE
Uncharacterized protein {ECO:0000313|EMBL:KHQ95826.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8149_14
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9882..10676)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B0EFC rbh
MHYT domain-containing protein {ECO:0000313|EMBL:AHB75841.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8149_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11101..12666
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003472BA7 rbh
Multidrug resistance protein B {ECO:0000313|EMBL:KHQ96949.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_cont_500_bf_scaffold_8149_16
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12823..13077
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C34D0
Rhodanese domain-containing protein {ECO:0000313|EMBL:EON12860.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
putative transmembrane protein
Displaying 16 items

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