ggKbase home page

SCNpilot_cont_500_bf_scaffold_4184

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4184_1
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..288
DNA (288bp) protein (96aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XV08_9PROT
SCNpilot_cont_500_bf_scaffold_4184_2
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(546..1775)
DNA (1230bp) protein (410aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Burkholderia sp. RPE64 RepID=R4WY53_9BURK rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:BAN26275.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_cont_500_bf_scaffold_4184_3
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1926..3263
DNA (1338bp) protein (446aa)
ABC transporter substrate-binding protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037C6A3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19910.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_4184_4
bacterium YEK0313, Bacteria

Not on your lists

3263..3589
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN86_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEJ15441.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4184_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3586..4350
DNA (765bp) protein (255aa)
Putative gluconate 5-dehydrogenase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A300_9PROT rbh
Putative gluconate 5-dehydrogenase {ECO:0000313|EMBL:EHL99430.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_4184_6
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..6042
DNA (1287bp) protein (429aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
histidinol dehydrogenase; K15509 sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] rbh
Histidinol dehydrogenase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSH6_9PROT rbh
SCNpilot_cont_500_bf_scaffold_4184_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6261..7385)
DNA (1125bp) protein (375aa)
Putative leucine-specific-binding protein LivK n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A122_9PROT
Putative leucine-specific-binding protein LivK {ECO:0000313|EMBL:EHM00685.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
livK; branched-chain amino acid ABC transporter, substrate-binding periplasmic component; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_4184_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7482..8645
DNA (1164bp) protein (388aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=Q9X5G9_STRC2 rbh
Methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:ETR77310.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
luciferase-like protein rbh
Displaying 8 items

View Taxonomy