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SCNpilot_cont_500_bf_scaffold_4265

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4265_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23..1054)
DNA (1032bp) protein (344aa)
ABC transporter permease protein 2 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I2Z1_AZOC5 rbh
DppB protein {ECO:0000313|EMBL:BAQ44573.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_4265_2
bacterium YEK0313, Bacteria

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comp(1415..3028)
DNA (1614bp) protein (538aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TU69_9BRAD rbh
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:CEJ15317.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_4265_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3184..5415)
DNA (2232bp) protein (744aa)
Histidine kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ITY0_METNO
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACL60838.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_4265_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5656..6987
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6739F
D-amino acid oxidase {ECO:0000313|EMBL:KJB95670.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
oxidoreductase
SCNpilot_cont_500_bf_scaffold_4265_5
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7072..8046
DNA (975bp) protein (325aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
delta-aminolevulinic acid dehydratase n=1 Tax=Pseudomonas fragi RepID=UPI000313A089 rbh
SCNpilot_cont_500_bf_scaffold_4265_6
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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8062..8550
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000379E756
Acyl dehydratase {ECO:0000313|EMBL:KII00260.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
acyl dehydratase
SCNpilot_cont_500_bf_scaffold_4265_7
unknown

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8701..8847
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4265_8
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9100..9768)
DNA (669bp) protein (223aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAL0_ACIAP
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:ADX46051.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_cont_500_bf_scaffold_4265_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9858..11450
DNA (1593bp) protein (531aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1]
Oxidoreductase, GMC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMA1_9PROT
Oxidoreductase, GMC family protein {ECO:0000313|EMBL:EDP65705.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_cont_500_bf_scaffold_4265_10
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11841..13082
DNA (1242bp) protein (414aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLZ7_TISMK
ydgK; Bcr/CflA family multidrug resistance transporter
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:AFK53785.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_4265_11
unknown

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comp(13107..13226)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 11 items

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