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SCNpilot_cont_500_bf_scaffold_4506

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4506_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..522
DNA (522bp) protein (174aa)
Amidohydrolase 2 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVL2_METNO
amidohydrolase 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4506_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

536..1405
DNA (870bp) protein (290aa)
Acetyl-CoA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9Q8_9BRAD rbh
Beta-lactamase {ECO:0000313|EMBL:ETR78319.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
beta-lactamase rbh
SCNpilot_cont_500_bf_scaffold_4506_3
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1496..2686)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FRF7_GLUOX
Uncharacterized protein {ECO:0000313|EMBL:KDE19583.1}; TaxID=1457393 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti 1023.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4506_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2915..3703
DNA (789bp) protein (263aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] rbh
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=DAPB_GRABC rbh
SCNpilot_cont_500_bf_scaffold_4506_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3709..4614)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AIA8_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE55812.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4506_6
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4898..5662
DNA (765bp) protein (255aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] rbh
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HE96_GLUDA rbh
SCNpilot_cont_500_bf_scaffold_4506_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5702..6133)
DNA (432bp) protein (144aa)
Putative toxin n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8V9_SPHJU
putative toxin
Putative toxin {ECO:0000313|EMBL:BAI99041.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_cont_500_bf_scaffold_4506_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6153..6431)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GVR8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB04038.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
prevent-host-death protein
SCNpilot_cont_500_bf_scaffold_4506_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6428..7561)
DNA (1134bp) protein (378aa)
putative acyltransferase (EC:2.3.1.-)
Acyltransferase 3 n=2 Tax=Acidiphilium RepID=A5FUS0_ACICJ
Acyltransferase 3 {ECO:0000313|EMBL:ABQ29352.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_4506_10
Acetobacter pomorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7582..8217
DNA (636bp) protein (212aa)
Ribosome maturation factor RimP n=1 Tax=Acetobacter pomorum DM001 RepID=F1YQ71_9PROT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=945681 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pomorum DM001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4506_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8259..9824
DNA (1566bp) protein (522aa)
NusA antitermination factor n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HF12_GLUDA rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A rbh
SCNpilot_cont_500_bf_scaffold_4506_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9922..10506
DNA (585bp) protein (195aa)
Hypothetical cytosolic protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPG1_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN77642.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4506_13
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10510..13545
DNA (3036bp) protein (1012aa)
Translation initiation factor IF-2 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=IF2_GLUDA rbh
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 rbh
SCNpilot_cont_500_bf_scaffold_4506_14
unknown

Not on your lists

comp(14045..14242)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4506_15
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14334..14702)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000305EBF0
ankyrin repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ63538.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Displaying 15 items

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