ggKbase home page

SCNpilot_cont_500_bf_scaffold_7092

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7092_1
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1348)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003716B92
Uncharacterized protein {ECO:0000313|EMBL:KDB04693.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
cyclopropane-fatty-acyl-phospholipid synthase
SCNpilot_cont_500_bf_scaffold_7092_2
unknown

Not on your lists

comp(1406..1741)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7092_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2015..2485)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ5_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93147.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_500_bf_scaffold_7092_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2698..3039
DNA (342bp) protein (114aa)
UPI0003D5BFF1 related cluster n=1 Tax=unknown RepID=UPI0003D5BFF1
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ETI60505.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_7092_5
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3036..3293
DNA (258bp) protein (86aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFA3_9SPHN
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EHJ60061.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_7092_6
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3305..4030
DNA (726bp) protein (242aa)
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
Acetoacetyl-CoA reductase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LBN7_9PROT rbh
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EKF06350.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
SCNpilot_cont_500_bf_scaffold_7092_7
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4060..5247
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C682 rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EXS68733.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
SCNpilot_cont_500_bf_scaffold_7092_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5310..5762
DNA (453bp) protein (151aa)
UPI0003D5994F related cluster n=1 Tax=unknown RepID=UPI0003D5994F
Uncharacterized protein {ECO:0000313|EMBL:ETI60522.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCNpilot_cont_500_bf_scaffold_7092_9
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6113
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJ21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11725.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
Cation transporting P-type ATPase
SCNpilot_cont_500_bf_scaffold_7092_10
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6106..6429
DNA (324bp) protein (108aa)
UPI0003D5C015 related cluster n=1 Tax=unknown RepID=UPI0003D5C015
Uncharacterized protein {ECO:0000313|EMBL:ETI60503.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7092_11
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..8251
DNA (1812bp) protein (604aa)
UPI0003D5EE16 related cluster n=1 Tax=unknown RepID=UPI0003D5EE16 rbh
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:ETI60502.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7092_12
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8248..8679
DNA (432bp) protein (144aa)
phosphate butyryltransferase (EC:2.3.1.19); K00625 phosphate acetyltransferase [EC:2.3.1.8]
Phosphate butyryltransferase {ECO:0000313|EMBL:CCA93170.1}; EC=2.3.1.19 {ECO:0000313|EMBL:CCA93170.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Phosphate butyryltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP18_9SPHN
Displaying 12 items

View Taxonomy