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SCNpilot_cont_500_bf_scaffold_7158

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7158_trna_1
unknown

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626..699
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_7158_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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944..2224
DNA (1281bp) protein (427aa)
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH12365.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EFH12365.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
oxidoreductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000380B6FD
oxidoreductase
SCNpilot_cont_500_bf_scaffold_7158_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2291..3097)
DNA (807bp) protein (269aa)
Aldolase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXF3_9BURK rbh
HpcH/HpaI aldolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_7158_3

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comp(3201..3995)
DNA (795bp) protein (265aa)
putative glutamine amidotransferase (EC:2.4.2.-); K07008 glutamine amidotransferase rbh
Glutamine amidotransferase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YE60_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN73645.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_7158_4
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4078..4797)
DNA (720bp) protein (240aa)
Aspartate racemase n=2 Tax=Rhizobium RepID=K5D338_RHILU
ygeA; putative racemase
Aspartate racemase {ECO:0000313|EMBL:KGE83222.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_cont_500_bf_scaffold_7158_5
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4956..5426
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=4 Tax=Agrobacterium RepID=F0LEA8_AGRSH
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJF74986.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
transcriptional regulator, AsnC family; K05800 Lrp/AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_7158_6
unknown

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comp(5449..5751)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7158_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5901..6230
DNA (330bp) protein (110aa)
Septum formation inhibitor Maf n=11 Tax=Acetobacter pasteurianus RepID=C7JGN7_ACEP3
Cell division inhibitor/septum formation inhibitor {ECO:0000313|EMBL:GAN76913.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
maf; septum formation inhibitor Maf
SCNpilot_cont_500_bf_scaffold_7158_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6371..6817
DNA (447bp) protein (149aa)
Probable transporter n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98IQ9_RHILO
transporter
Probable transporter {ECO:0000313|EMBL:BAB49457.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_7158_9
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6919..7791
DNA (873bp) protein (291aa)
mazG; protein MazG; K04765 ATP diphosphatase [EC:3.6.1.8] rbh
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003199833 rbh
MazG family protein {ECO:0000313|EMBL:EFH10576.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_500_bf_scaffold_7158_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7877..8791)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWA5_AZOBR rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN75927.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7158_11
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8809..10020)
DNA (1212bp) protein (404aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
ATPase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003823421 rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_7158_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10061..10462)
DNA (402bp) protein (134aa)
PAS domain S-box protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGU9_9PROT
Two component transcriptional regulator {ECO:0000313|EMBL:GAN77422.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative two-component system hybrid sensor and regulator
Displaying 13 items

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