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SCNpilot_cont_500_bf_scaffold_2108

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2108_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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85..564
DNA (480bp) protein (160aa)
Heat shock protein Hsp20 n=3 Tax=Acidiphilium RepID=A5FVK1_ACICJ
Heat shock protein Hsp20/HspA/IbpA {ECO:0000313|EMBL:GAN76400.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
heat shock protein Hsp20
SCNpilot_cont_500_bf_scaffold_2108_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

661..927
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237E074
Uncharacterized protein {ECO:0000313|EMBL:GAN76399.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2108_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1390..2751)
DNA (1362bp) protein (454aa)
Radical SAM family Fe-S protein n=1 Tax=Commensalibacter intestini A911 RepID=G6EXD5_9PROT rbh
Iron-sulfur (Fe-S) oxidoreductase/methyltransferase {ECO:0000313|EMBL:GAN76541.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
radical SAM family Fe-S protein rbh
SCNpilot_cont_500_bf_scaffold_2108_4
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2748..3986)
DNA (1239bp) protein (413aa)
hopanoid biosynthesis associated glycosyl transferase protein HpnI; K00720 ceramide glucosyltransferase [EC:2.4.1.80] rbh
Putative glycosyl transferase protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HA99_GLUDA rbh
Hopanoid biosynthesis associated glycosyl transferase protein HpnI {ECO:0000313|EMBL:ACI51073.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_2108_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4026..4655)
DNA (630bp) protein (210aa)
Toluene transport system Ttg2D protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) PF1_GRABC">RepID=Q0BPF1_GRABC
ABC transporter toluene transporter auxiliary component Ttg1D/Ttg2D {ECO:0000313|EMBL:GAN76283.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
toluene transport system Ttg2D protein
SCNpilot_cont_500_bf_scaffold_2108_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4652..6604)
DNA (1953bp) protein (651aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Acidiphilium RepID=A5FZK3_ACICJ rbh
SCNpilot_cont_500_bf_scaffold_2108_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6620..7519)
DNA (900bp) protein (300aa)
ispA; geranyltranstransferase (EC:2.5.1.10); K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Polyprenyl synthetase {ECO:0000313|EMBL:EGO96854.1}; EC=2.5.1.10 {ECO:0000313|EMBL:EGO96854.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Farnesyl-diphosphate synthase n=3 Tax=Acidiphilium RepID=A5FXS8_ACICJ rbh
SCNpilot_cont_500_bf_scaffold_2108_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7831..8760
DNA (930bp) protein (310aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Acidiphilium RepID=A5FZK2_ACICJ rbh
SCNpilot_cont_500_bf_scaffold_2108_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9939
DNA (1164bp) protein (388aa)
Molybdenum cofactor biosynthesis protein A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPE8_GRABC rbh
molybdenum cofactor biosynthesis protein A rbh
Molybdenum cofactor biosynthesis protein A {ECO:0000313|EMBL:ABI63304.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_2108_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10353..11126)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UCS2_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EFV83267.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2108_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11447..12289
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000364D5F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG05595.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_cont_500_bf_scaffold_2108_12
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..12831)
DNA (426bp) protein (142aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine-R-sulfoxide reductase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LVP5_METRJ
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49096.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_500_bf_scaffold_2108_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12908..14089
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C5D5D rbh
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC72897.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCF41.20c; hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2108_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14258..15097)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000371DC6B
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46269.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2108_15
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15097..16878)
DNA (1782bp) protein (594aa)
Putative gamma-glutamyltransferase {ECO:0000313|EMBL:EFH10637.1}; EC=2.3.2.2 {ECO:0000313|EMBL:EFH10637.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Putative gamma-glutamyltransferase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPZ0_9PROT rbh
SCNpilot_cont_500_bf_scaffold_2108_16
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16951..17328
DNA (378bp) protein (126aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
PhnN family protein; K05774 ribose 1,5-bisphosphokinase [EC:2.7.4.23]
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XPY8_9PROT
Displaying 16 items

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