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SCNpilot_cont_500_bf_scaffold_2272

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2272_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..235)
DNA (234bp) protein (78aa)
ABC transporter, solute-binding protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8Q0_9PROT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EHL95456.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_2272_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(458..1921)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037AA6D1
Membrane protein {ECO:0000313|EMBL:KJB93608.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Outer membrane protein; K12340 outer membrane channel protein
SCNpilot_cont_500_bf_scaffold_2272_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1908..5000)
DNA (3093bp) protein (1031aa)
Cation/multidrug efflux pump protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWS2_TISMK rbh
cation/multidrug efflux pump protein rbh
Cation/multidrug efflux pump protein {ECO:0000313|EMBL:AFK57210.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_2272_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5000..6073)
DNA (1074bp) protein (358aa)
Putative HlyD-like secretion protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWS3_TISMK
Hemolysin D {ECO:0000313|EMBL:KJR63064.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative HlyD-like secretion protein
SCNpilot_cont_500_bf_scaffold_2272_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6272..7456)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XT70_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35561.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_cont_500_bf_scaffold_2272_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7696..8730
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43180.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
SCNpilot_cont_500_bf_scaffold_2272_7
unknown

Not on your lists

8730..9083
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2272_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9080..10096
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G1F8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92506.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_2272_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10434..11345)
DNA (912bp) protein (304aa)
elongation factor Ts n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EF146F rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
tsf; elongation factor Ts; K02357 elongation factor Ts rbh
SCNpilot_cont_500_bf_scaffold_2272_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11420..12202)
DNA (783bp) protein (261aa)
30S ribosomal protein S2 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RS2_GRABC
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
SCNpilot_cont_500_bf_scaffold_2272_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12435..13613)
DNA (1179bp) protein (393aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00035FE08E rbh
Citrate synthase {ECO:0000313|EMBL:EJL30626.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_500_bf_scaffold_2272_12
bacterium YEK0313, Bacteria

Not on your lists

13742..14824
DNA (1083bp) protein (361aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ78_9RHIZ rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_2272_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15002..15463
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EKH5_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51345.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_2272_14
unknown

Not on your lists

15544..15801
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2272_15
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15889..16674
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4L8_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ72270.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_2272_16
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16761..17600
DNA (840bp) protein (280aa)
alpha/beta family hydrolase (EC:3.1.1.1) rbh
Putative Hydrolase, alpha/beta hydrolase fold family {ECO:0000313|EMBL:ABQ34665.1}; EC=3.1.1.1 {ECO:0000313|EMBL:ABQ34665.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative Hydrolase, alpha/beta hydrolase fold family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EES1_BRASB rbh
SCNpilot_cont_500_bf_scaffold_2272_17
unknown

Not on your lists

17727..17987
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2272_18
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18381..20819
DNA (2439bp) protein (813aa)
Adhesin/invasin TibA autotransporter n=1 Tax=Acetobacter pomorum DM001 RepID=F1YV50_9PROT
Adhesin family protein {ECO:0000313|EMBL:KFL87891.1}; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
outer membrane protein
SCNpilot_cont_500_bf_scaffold_2272_19
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20896..21858)
DNA (963bp) protein (321aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TVJ3_BORBO rbh
LivM protein {ECO:0000313|EMBL:BAQ49870.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2272_20
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21855..22721)
DNA (867bp) protein (289aa)
Branched-chain amino acid ABC transporter,permease protein n=5 Tax=Bordetella bronchiseptica RepID=K0MP11_BORBM rbh
LivH protein {ECO:0000313|EMBL:BAQ49871.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
branched-chain amino acid ABC transporter permease rbh
SCNpilot_cont_500_bf_scaffold_2272_21
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22718..23461)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLH6_BRAJP
LivF protein {ECO:0000313|EMBL:BAQ49872.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2272_22
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23814..24629)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLH5_BRAJP
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49873.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2272_23
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24657..25742)
DNA (1086bp) protein (362aa)
Branched-chain amino acid ABC transporter, binding protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TXX0_BORBO
LivK protein {ECO:0000313|EMBL:BAQ49874.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
branched-chain amino acid ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2272_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26001..27644
DNA (1644bp) protein (548aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase (NADH) large subunit n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2X0_SPHWW
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 24 items

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