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SCNpilot_cont_500_bf_scaffold_2289

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2289_1
unknown

Not on your lists

comp(1..954)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035F2899
SCNpilot_cont_500_bf_scaffold_2289_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1302..1931)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037A5F22
Glutathione S-transferase {ECO:0000313|EMBL:GAN77241.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
glutathione S-transferase family protein
SCNpilot_cont_500_bf_scaffold_2289_3
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2036..2542
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZGI0_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI50888.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_2289_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2539..3087
DNA (549bp) protein (183aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative ubiquinone biosynthesis protein Coq7; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
Ubiquinone biosynthesis protein COQ7 n=3 Tax=Acidiphilium RepID=A5FUU9_ACICJ
SCNpilot_cont_500_bf_scaffold_2289_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3097..3882)
DNA (786bp) protein (262aa)
2-keto-4-pentenoate hydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036FEEB5
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:ETX08518.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative fumarylacetoacetate (FAA) hydrolase protein
SCNpilot_cont_500_bf_scaffold_2289_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3997..4683)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000366A41E
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHL96084.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
N-acetyltransferase GCN5
SCNpilot_cont_500_bf_scaffold_2289_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4808..8032)
DNA (3225bp) protein (1075aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUF2_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:GAN77201.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2289_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8213..8653)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375529E
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EHL96042.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2289_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8871..9272
DNA (402bp) protein (134aa)
endonuclease (EC:3.1.-.-); K07460 putative endonuclease
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000369DE26
UPF0102 protein Asru_0622_02 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_2289_10
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9382..10218
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035DC0F3
Putative membrane protein {ECO:0000313|EMBL:EFH09913.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative S-adenosylmethionine uptake transporter
SCNpilot_cont_500_bf_scaffold_2289_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10335..11609
DNA (1275bp) protein (425aa)
Putative Na+/H+ antiporter n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIJ2_AZOL4 rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KJR62286.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
SCNpilot_cont_500_bf_scaffold_2289_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11571..12011)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036778FB
Uncharacterized protein {ECO:0000313|EMBL:EFH10938.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2289_13
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12008..12637)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003703D4D
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFH10937.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
SCNpilot_cont_500_bf_scaffold_2289_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12737..12988)
DNA (252bp) protein (84aa)
AsnC family transcriptional regulator n=1 Tax=Novispirillum itersonii RepID=UPI00036580DC
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFH10189.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2289_15
unknown

Not on your lists

comp(13109..14617)
DNA (1509bp) protein (503aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2289_16
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14767..16341)
DNA (1575bp) protein (525aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y326_9PROT rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EGY00074.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_500_bf_scaffold_2289_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16468..17649)
DNA (1182bp) protein (394aa)
Multidrug resistance efflux pump n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0U014_9BRAD
Multidrug resistance efflux pump {ECO:0000313|EMBL:CCE12052.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative multidrug resistance protein; K03543 multidrug resistance protein A
SCNpilot_cont_500_bf_scaffold_2289_18
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17846..18487
DNA (642bp) protein (214aa)
TetR family transcriptional regulator n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XP52_DESMR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KHK02435.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2289_19
unknown

Not on your lists

comp(18587..18859)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2289_20
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19060..20832
DNA (1773bp) protein (591aa)
ilvG; acetolactate synthase isozyme II large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZY11_9PROT rbh
Thiamine pyrophosphate protein {ECO:0000313|EMBL:EHM02142.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_2289_21
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20843..22429
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003828834
Uncharacterized protein {ECO:0000313|EMBL:AIB13883.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
TPR repeat-containing protein
SCNpilot_cont_500_bf_scaffold_2289_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22604..22804)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCR0_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70076.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_2289_23
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22891..23631)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RNZ0_RHORT
hypothetical protein; K09792 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC24155.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_500_bf_scaffold_2289_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23795..24016
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTB3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78708.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_500_bf_scaffold_2289_25
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24009..24677
DNA (669bp) protein (223aa)
peptidase S41 n=1 Tax=Methyloferula stellata RepID=UPI00036E3DC0
Uncharacterized protein {ECO:0000313|EMBL:KJV10369.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
fixN; cbb3-type cytochrome c oxidase subunit I
Displaying 25 items

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