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SCNpilot_cont_500_bf_scaffold_2485

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2485_1
unknown

Not on your lists

1..234
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348..791)
DNA (444bp) protein (148aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI0003608AB7
Uncharacterized protein {ECO:0000313|EMBL:AIT06619.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2485_3
unknown

Not on your lists

comp(969..1142)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_4
unknown

Not on your lists

1272..1433
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_5
unknown

Not on your lists

1430..1618
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1635..2060)
DNA (426bp) protein (142aa)
DNA-binding protein H-NS n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X4U3_DELAC
DNA-binding protein H-NS {ECO:0000313|EMBL:EPD40132.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
histone family protein nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
SCNpilot_cont_500_bf_scaffold_2485_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2088..3209)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPR1_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50915.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_2485_8
unknown

Not on your lists

3295..3999
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3996..5885
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000381D7F6
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAN78774.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative transmembrane traG homologue/component of type IV secretion system; K03205 type IV secretion system protein VirD4
SCNpilot_cont_500_bf_scaffold_2485_10
unknown

Not on your lists

5898..6155
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_11
unknown

Not on your lists

6103..6693
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6690..6938
DNA (249bp) protein (83aa)
UPI0003CDD83D related cluster n=1 Tax=unknown RepID=UPI0003CDD83D
CopG family transcripitonal regulator {ECO:0000313|EMBL:ESY65407.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2485_13
unknown

Not on your lists

7017..7250
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_14
unknown

Not on your lists

comp(7142..7444)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_15
unknown

Not on your lists

comp(7434..7832)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_16
unknown

Not on your lists

comp(7832..8602)
DNA (771bp) protein (257aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_17
unknown

Not on your lists

8702..8851
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_18
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8848..9423
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F189F0
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:EUB97229.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
heat shock protein DnaJ domain-containing protein
SCNpilot_cont_500_bf_scaffold_2485_19
unknown

Not on your lists

9420..9599
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_20
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10029..10379
DNA (351bp) protein (117aa)
Single-stranded DNA-binding protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ET29_METSB
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_2485_21
unknown

Not on your lists

10446..11057
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_22
unknown

Not on your lists

11059..11274
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_23
unknown

Not on your lists

11271..11624
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_24
unknown

Not on your lists

11638..12195
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_25
unknown

Not on your lists

12192..12683
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_26
unknown

Not on your lists

12836..13747
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_27
unknown

Not on your lists

13902..14477
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2485_28
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14555..15115
DNA (561bp) protein (187aa)
UPI0003CDDFC3 related cluster n=1 Tax=unknown RepID=UPI0003CDDFC3
Uncharacterized protein {ECO:0000313|EMBL:ESY16753.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
SCNpilot_cont_500_bf_scaffold_2485_29
Enterobacter sp. 42324, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15508..15993
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Enterobacter cloacae complex RepID=U7CNJ9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJM41349.1}; TaxID=1619249 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 42324.;"
hypothetical protein
Displaying 29 items

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