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SCNpilot_cont_500_bf_scaffold_2746

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2746_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..453)
DNA (453bp) protein (151aa)
Peptide chain release factor 1 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RF1_GRABC
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
SCNpilot_cont_500_bf_scaffold_2746_2
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(460..1695)
DNA (1236bp) protein (412aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] rbh
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Histidine--tRNA ligase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUJ9_GRABC rbh
SCNpilot_cont_500_bf_scaffold_2746_3
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1943..2224)
DNA (282bp) protein (94aa)
addiction module antitoxin n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDE79
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
SCNpilot_cont_500_bf_scaffold_2746_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2658..3272)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237EF1F
Diguanylate cyclase {ECO:0000313|EMBL:KGM32298.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2746_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3450..3896)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003673934
Ribosomal protein L32-like protein {ECO:0000313|EMBL:EHM00887.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2746_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4011..4271)
DNA (261bp) protein (87aa)
Glutaredoxin-3 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HJ33_GLUDA
grxC; glutaredoxin-3; K03676 glutaredoxin 3
Glutaredoxin {ECO:0000313|EMBL:GAN78499.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_2746_7
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4407..4937
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQV0_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN68022.1}; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2746_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..5678)
DNA (450bp) protein (150aa)
Uncharacterized protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RNI5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH11132.1}; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2746_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5866..9306)
DNA (3441bp) protein (1147aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AHJ61900.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AHJ61900.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] rbh
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVV3_GRABC rbh
SCNpilot_cont_500_bf_scaffold_2746_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9387..10256)
DNA (870bp) protein (290aa)
Methyltransferase domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLA7_9PROT
Transcriptional regulator ArsR/methyltransferase {ECO:0000313|EMBL:GAN76816.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative transcriptional regulator (ArsR family) with SAM-dependent methyltransferase domain
SCNpilot_cont_500_bf_scaffold_2746_11
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10499..12574
DNA (2076bp) protein (692aa)
transketolase; K00615 transketolase [EC:2.2.1.1] rbh
Transketolase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZF58_GLUDA rbh
Transketolase {ECO:0000313|EMBL:ACI52102.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_2746_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12606..13361
DNA (756bp) protein (252aa)
GntR family transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=UPI00036C178B
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH89125.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_2746_13
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..13792)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Acetobacter pasteurianus 386B RepID=S6D142_ACEPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCT60857.1}; TaxID=1266844 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus 386B.;"
SCNpilot_cont_500_bf_scaffold_2746_14
unknown

Not on your lists

comp(13758..14009)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2746_15
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14223..15560
DNA (1338bp) protein (446aa)
allophanate hydrolase; K01457 allophanate hydrolase [EC:3.5.1.54]
allophanate hydrolase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034982D6
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:GAN51059.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
SCNpilot_cont_500_bf_scaffold_2746_16
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15557..15970
DNA (414bp) protein (138aa)
allophanate hydrolase; K01457 allophanate hydrolase [EC:3.5.1.54]
Allophanate hydrolase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M5T4_METRJ
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:GAN51059.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
SCNpilot_cont_500_bf_scaffold_2746_17
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15967..16914
DNA (948bp) protein (316aa)
ABC transporter substrate-binding protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003464A26
NMT1/THI5-like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
NMT1/THI5 like domain protein {ECO:0000313|EMBL:ACB26535.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_2746_18
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16934..17800
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M5T7_METRJ
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACB26534.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_2746_19
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17793..18566
DNA (774bp) protein (258aa)
sulfonate ABC transporter ATP-binding protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000368688A rbh
ABC transporter related protein {ECO:0000313|EMBL:AIQ88209.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2746_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19085..21112)
DNA (2028bp) protein (676aa)
Putative molybdopterin oxidoreductase id=2985452 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2746_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21170..21715)
DNA (546bp) protein (182aa)
Metallophosphoesterase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQZ5_AZOS1
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:BAI70824.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_2746_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21798..22892
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M5D9_METRJ
Uncharacterized protein {ECO:0000313|EMBL:GAN78361.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2746_23
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22985..24019
DNA (1035bp) protein (345aa)
Putative kinase n=1 Tax=uncultured bacterium RepID=K2CS33_9BACT rbh
GHMP kinase
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_39_13_curated
SCNpilot_cont_500_bf_scaffold_2746_24
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24048..25832
DNA (1785bp) protein (595aa)
Uncharacterized protein {ECO:0000313|EMBL:KHK58191.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
SCNpilot_cont_500_bf_scaffold_2746_25
unknown

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25890..26381
DNA (492bp) protein (164aa)

This feature has no annotations

Displaying 25 items

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