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SCNpilot_cont_500_bf_scaffold_2784

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2784_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

205..1212
DNA (1008bp) protein (336aa)
Glycosyl transferase, family 2 n=3 Tax=Acidiphilium RepID=A5FYP5_ACICJ
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:EGO94830.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCNpilot_cont_500_bf_scaffold_2784_2
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1209..2264
DNA (1056bp) protein (352aa)
Ketal pyruvate transferase protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EJZ9_9RHOB
Ketal pyruvate transferase protein {ECO:0000313|EMBL:EBA11546.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CCS2.;"
ExoV-like protein
SCNpilot_cont_500_bf_scaffold_2784_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2427..4112
DNA (1686bp) protein (562aa)
putative methyltransferase (EC:2.1.1.-) rbh
Putative methyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IY83_ACIMA rbh
Methyltransferase {ECO:0000313|EMBL:GAN76061.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_2784_4
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4208..4852)
DNA (645bp) protein (215aa)
Asp/Glu/Hydantoin racemase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRX9_9PROT
Asp/Glu/Hydantoin racemase {ECO:0000313|EMBL:EFH09940.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hydantoin racemase
SCNpilot_cont_500_bf_scaffold_2784_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4961..5389
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRY0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH09941.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2784_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5386..5889
DNA (504bp) protein (168aa)
UPF0262 protein GbCGDNIH1_1393 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Y1393_GRABC
UPF0262 protein Asru_0337_05 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2784_7
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5886..6974
DNA (1089bp) protein (363aa)
mtnA; methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] rbh
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5
Methylthioribose-1-phosphate isomerase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HLJ6_GLUDA rbh
SCNpilot_cont_500_bf_scaffold_2784_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6985..7935
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QJ39_GLUHA
Uncharacterized protein {ECO:0000313|EMBL:GAN77488.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2784_9
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7981..9006
DNA (1026bp) protein (342aa)
alcohol dehydrogenase (EC:1.1.1.1); K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:CCA93122.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CCA93122.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Alcohol dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INX0_9SPHN rbh
SCNpilot_cont_500_bf_scaffold_2784_10
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9204..9629
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00030C1BD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KAI95650.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
SCNpilot_cont_500_bf_scaffold_2784_11
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9626..10333
DNA (708bp) protein (236aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VM04_CAUST
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_500_bf_scaffold_2784_12
unknown

Not on your lists

comp(10356..10670)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2784_13
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10806..11216)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP31_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH10936.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
sulfide dehydrogenase
SCNpilot_cont_500_bf_scaffold_2784_14
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11249..12157
DNA (909bp) protein (303aa)
cysteine synthase A (O-acetylserine sulfhydrylase A) protein; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase A n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZP15_9PROT
Cysteine synthase A {ECO:0000313|EMBL:GAN81062.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
SCNpilot_cont_500_bf_scaffold_2784_15
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12463..13176)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZGV1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT71119.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2784_16
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13151..15787)
DNA (2637bp) protein (879aa)
Mechanosensitive ion channel n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BR08_GRABC
mechanosensitive ion channel MscS
Mechanosensitive ion channel {ECO:0000313|EMBL:ABI62744.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_2784_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16033..16224
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D25C9
Uncharacterized protein {ECO:0000313|EMBL:EHM03113.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2784_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16436..17185
DNA (750bp) protein (250aa)
Electron transfer flavoprotein beta-subunit n=3 Tax=Acidiphilium RepID=A5FUU4_ACICJ rbh
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:GAN77926.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit rbh
SCNpilot_cont_500_bf_scaffold_2784_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17188..18129
DNA (942bp) protein (314aa)
Electron transfer flavoprotein, alpha subunit n=2 Tax=Acidiphilium RepID=A5FUU3_ACICJ rbh
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:GAN77927.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit rbh
SCNpilot_cont_500_bf_scaffold_2784_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18130..19059
DNA (930bp) protein (310aa)
hbd; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036BE041 rbh
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:GAN77928.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_2784_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19119..19904)
DNA (786bp) protein (262aa)
Transcriptional regulator, IclR family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0S9_9PROT
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EHM00811.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2784_22
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20021..20791
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003679195 rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABM56100.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_2784_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20772..21458
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003701C8A
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EHM00814.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_2784_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21455..22303
DNA (849bp) protein (283aa)
ribulose-5-phosphate 3-epimerase n=1 Tax=Elioraea tepidiphila RepID=UPI0003778615 rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:EHL99931.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
polysaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_2784_25
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22322..23716
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003675B8D rbh
Amidase {ECO:0000313|EMBL:EDP66682.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
amidase
SCNpilot_cont_500_bf_scaffold_2784_26
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23713..24855
DNA (1143bp) protein (381aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Rhizobium sp. CF080 RepID=J3BKN2_9RHIZ rbh
Luciferase family protein {ECO:0000313|EMBL:EUB99905.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
luciferase-like protein rbh
SCNpilot_cont_500_bf_scaffold_2784_27
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24880..26481
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375F324 rbh
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EHL99930.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein
SCNpilot_cont_500_bf_scaffold_2784_28
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26614..27327
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00037D1D60
Uncharacterized protein {ECO:0000313|EMBL:EJW13190.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2784_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27317..28465)
DNA (1149bp) protein (383aa)
deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1); K01129 dGTPase [EC:3.1.5.1] rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSP3_GRABC rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_2784_30
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28534..28863
DNA (330bp) protein (110aa)
Iron-sulfur cluster insertion protein ErpA n=2 Tax=Acidiphilium RepID=F0J631_ACIMA
erpA; iron-sulfur cluster insertion protein ErpA
Putative iron-sulfur assembly protein {ECO:0000313|EMBL:EGO95679.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Displaying items 1-30 of 42 in total

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