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SCNpilot_cont_500_bf_scaffold_2856

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2856_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1281)
DNA (1281bp) protein (427aa)
sulfate transporter n=1 Tax=Kaistia granuli RepID=UPI00037C4416 rbh
Sulfate transporter {ECO:0000313|EMBL:KGM31493.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
sulfate transporter rbh
SCNpilot_cont_500_bf_scaffold_2856_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1539..3221
DNA (1683bp) protein (561aa)
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EFH12484.1}; EC=3.6.1.11 {ECO:0000313|EMBL:EFH12484.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJN8_9PROT rbh
mcp; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein rbh
SCNpilot_cont_500_bf_scaffold_2856_trna_1
unknown

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comp(3309..3381)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2856_3
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3560..4147)
DNA (588bp) protein (196aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BST7_GRABC
SCNpilot_cont_500_bf_scaffold_2856_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4180..4707)
DNA (528bp) protein (176aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BST6_GRABC
SCNpilot_cont_500_bf_scaffold_2856_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4700..7606)
DNA (2907bp) protein (969aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=GYRA_GRABC rbh
SCNpilot_cont_500_bf_scaffold_2856_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7906..8829)
DNA (924bp) protein (308aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ABQ31886.1}; EC=4.1.3.4 {ECO:0000313|EMBL:ABQ31886.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J524_ACIMA
SCNpilot_cont_500_bf_scaffold_2856_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9091..10251
DNA (1161bp) protein (387aa)
Efflux transporter, RND family, MFP subunit (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RUL3_9PROT rbh
Multidrug resistance efflux pump acriflavin resistance protein {ECO:0000313|EMBL:GAN75802.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
multidrag resistance protein rbh
SCNpilot_cont_500_bf_scaffold_2856_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10268..13402
DNA (3135bp) protein (1045aa)
RND efflux transporter, HAE1 family, translocase subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9U0_HYPSM rbh
RND efflux transporter, HAE1 family, translocase subunit {ECO:0000313|EMBL:CCB64971.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
HAE1 family RND efflux transporter translocase subunit rbh
SCNpilot_cont_500_bf_scaffold_2856_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13581..14624)
DNA (1044bp) protein (348aa)
Putative neuraminidase n=1 Tax=uncultured bacterium 888 RepID=B8R8R8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2856_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14752..15801
DNA (1050bp) protein (350aa)
dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369182C rbh
Dehydrogenase {ECO:0000313|EMBL:KJC44825.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
malate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_2856_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..18108
DNA (2292bp) protein (764aa)
Carbon-monoxide dehydrogenase large subunit n=2 Tax=Azospirillum brasilense Sp245 RepID=G8AKK1_AZOBR
coxL1; carbon-monoxide dehydrogenase large subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 12 items

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