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SCNpilot_cont_500_bf_scaffold_2869

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2869_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0K7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30574.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative mercuric transport protein, periplasmic
SCNpilot_cont_500_bf_scaffold_2869_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222..632)
DNA (411bp) protein (137aa)
Mercuric transport protein MerT n=1 Tax=Afipia sp. 1NLS2 RepID=D6V502_9BRAD
Mercuric transport protein MerT {ECO:0000313|EMBL:EFI53032.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
mercuric transport protein
SCNpilot_cont_500_bf_scaffold_2869_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

746..1141
DNA (396bp) protein (132aa)
MerR family transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4M3_9RHIZ
MerR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_2869_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1182..1496
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FT72_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28804.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_2869_5
unknown

Not on your lists

1496..1717
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2869_6
unknown

Not on your lists

1717..1821
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2869_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1855..2601
DNA (747bp) protein (249aa)
Site-specific recombinase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YPS6_9PROT
Site-specific recombinase {ECO:0000313|EMBL:EKN00827.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
resolvase-like protein
SCNpilot_cont_500_bf_scaffold_2869_8
Acetobacter pomorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2670..3329
DNA (660bp) protein (220aa)
Cobyrinic Acid Ac-Diamide Synthase n=1 Tax=Acetobacter pomorum DM001 RepID=F1YTL7_9PROT
Cobyrinic Acid Ac-Diamide Synthase {ECO:0000313|EMBL:EGE47873.1}; TaxID=945681 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pomorum DM001.;"
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
SCNpilot_cont_500_bf_scaffold_2869_9
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3634..4464)
DNA (831bp) protein (277aa)
Initiator RepB protein n=1 Tax=Acidiphilium sp. PM RepID=F7SC64_9PROT rbh
Initiator RepB protein {ECO:0000313|EMBL:EGO93262.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
replication initiation protein B
SCNpilot_cont_500_bf_scaffold_2869_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5080..5796)
DNA (717bp) protein (239aa)
Putative NADPH-dependent FMN reductase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5B6_ACIMA rbh
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KJB90925.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative NADPH-dependent FMN reductase; K11811 arsenical resistance protein ArsH rbh
SCNpilot_cont_500_bf_scaffold_2869_11

Not on your lists

comp(5796..6149)
DNA (354bp) protein (118aa)
arsenate reductase n=1 Tax=Xanthobacteraceae RepID=UPI000373FF7D
Arsenate reductase {ECO:0000313|EMBL:AIZ47779.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
arsC1; arsenate reductase
SCNpilot_cont_500_bf_scaffold_2869_12
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6146..7219)
DNA (1074bp) protein (358aa)
Arsenical-resistance protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QV12_METTR rbh
Arsenite efflux pump ACR3 {ECO:0000313|EMBL:EKN01314.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
arsB2; arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
SCNpilot_cont_500_bf_scaffold_2869_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7216..7716)
DNA (501bp) protein (167aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4P255_9CAUL
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:CDH44022.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
SCNpilot_cont_500_bf_scaffold_2869_14
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7728..8225)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002D3AF3C
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCJ06853.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_2869_15
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8222..8581)
DNA (360bp) protein (120aa)
Transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YGZ4_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EKM98156.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2869_16
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8716..9201
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M980_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB28055.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_2869_17
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9195..9671
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M979_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB28054.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_2869_18
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9711..10310)
DNA (600bp) protein (200aa)
Conjugal transfer protein TraD n=1 Tax=Acetobacter pasteurianus 386B RepID=S6DCW5_ACEPA
traD; conjugal transfer protein TraD
Conjugal transfer protein TraD {ECO:0000313|EMBL:CCT61026.1}; TaxID=1266844 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus 386B.;"
SCNpilot_cont_500_bf_scaffold_2869_19

Not on your lists

10528..13572
DNA (3045bp) protein (1015aa)
Conjugal transfer protein TrbA n=3 Tax=Sphingobium RepID=T0I5E5_9SPHN
traA; conjugal transfer relaxase TraA
Uncharacterized protein {ECO:0000313|EMBL:KKN72710.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_2869_20
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13576..14319
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B6Q8_METEA
Uncharacterized protein {ECO:0000313|EMBL:KKC23962.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2869_21
unknown

Not on your lists

comp(14459..14578)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2869_22
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14831..16093)
DNA (1263bp) protein (421aa)
Putative major facilitator superfamily transporter n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2L2_ACIMA rbh
putative major facilitator superfamily transporter rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:BAJ81956.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_2869_23
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16090..18564)
DNA (2475bp) protein (825aa)
Heavy metal translocating P-type ATPase n=1 Tax=Acidiphilium sp. PM RepID=F7SAL0_9PROT rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EGO93830.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
heavy metal translocating P-type ATPase
SCNpilot_cont_500_bf_scaffold_2869_24
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18578..19255)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L7S3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF06331.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein; K06196 cytochrome c-type biogenesis protein
SCNpilot_cont_500_bf_scaffold_2869_25
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19252..19467)
DNA (216bp) protein (72aa)
Heavy metal transport/detoxification protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAL2_9PROT
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EGO93832.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
heavy metal transport/detoxification protein
SCNpilot_cont_500_bf_scaffold_2869_26
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19473..19943)
DNA (471bp) protein (157aa)
Putative transcriptional regulator protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAL3_9PROT
Putative transcriptional regulator protein {ECO:0000313|EMBL:EGO93833.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
MerR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2869_27
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20269..21609)
DNA (1341bp) protein (447aa)
regulatory protein; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J4I4_9SPHN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFG89875.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
SCNpilot_cont_500_bf_scaffold_2869_28
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21698..23188)
DNA (1491bp) protein (497aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] rbh
Mercuric reductase {ECO:0000313|EMBL:BAJ81995.1}; EC=1.16.1.1 {ECO:0000313|EMBL:BAJ81995.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Mercuric reductase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J349_ACIMA rbh
Displaying 28 items

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