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SCNpilot_cont_500_bf_scaffold_2916

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2916_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246..1313)
DNA (1068bp) protein (356aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDQ8_XANP2
phenylacetate-CoA oxygenase/reductase subunit PaaK; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
Phenylacetate-CoA oxygenase/reductase, PaaK subunit {ECO:0000313|EMBL:ABS66151.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2916_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1310..2542)
DNA (1233bp) protein (411aa)
Major facilitator transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JK32_9PROT
Major facilitator transporter {ECO:0000313|EMBL:EKE74802.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
transporter
SCNpilot_cont_500_bf_scaffold_2916_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2667..3872
DNA (1206bp) protein (402aa)
CoA-transferase family III protein {ECO:0000313|EMBL:EFH12410.1}; EC=2.8.3.16 {ECO:0000313|EMBL:EFH12410.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
CoA transferase n=1 Tax=Elioraea tepidiphila RepID=UPI00037140E2 rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
SCNpilot_cont_500_bf_scaffold_2916_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4092..5186)
DNA (1095bp) protein (365aa)
Alkanal monooxygenase (FMN-linked) n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU28_PARL1
alkanal monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2916_5
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5334..6167)
DNA (834bp) protein (278aa)
Transcriptional regulator, MarR family with acetyltransferase activity n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LD05_AGRSH
MarR family transcriptional regulator
Transcriptional regulator, MarR family with acetyltransferase activity {ECO:0000313|EMBL:ADY66965.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
SCNpilot_cont_500_bf_scaffold_2916_6
unknown

Not on your lists

comp(6164..7252)
DNA (1089bp) protein (363aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2916_7
unknown

Not on your lists

comp(7206..8021)
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2916_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8312..9061)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C7P1_9GAMM
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_500_bf_scaffold_2916_9
unknown

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comp(9248..9409)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2916_10
unknown

Not on your lists

9532..10035
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2916_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10167..11381)
DNA (1215bp) protein (405aa)
luciferase family protein; K14733 limonene 1,2-monooxygenase [EC:1.14.13.107]
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured alpha proteobacterium HF0130_20P23 RepID=E0XTA1_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2916_12
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11675..12184)
DNA (510bp) protein (170aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AVJ2_HERA2
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_2916_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12804..13499
DNA (696bp) protein (232aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] rbh
ATP phosphoribosyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTC2_GRABC rbh
SCNpilot_cont_500_bf_scaffold_2916_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13501..14895
DNA (1395bp) protein (465aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTC3_GRABC rbh
SCNpilot_cont_500_bf_scaffold_2916_15
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14952..15170
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=IF1_GRABC
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_2916_16
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15342..15932
DNA (591bp) protein (197aa)
Maf-like protein maf n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIK2_9PROT
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Maf protein; K06287 septum formation protein
SCNpilot_cont_500_bf_scaffold_2916_17
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15929..17101
DNA (1173bp) protein (391aa)
ribonuclease E (EC:3.1.4.-); K01128 [EC:3.1.4.-] rbh
Ribonuclease E {ECO:0000313|EMBL:ABI61926.1}; EC=3.1.4.- {ECO:0000313|EMBL:ABI61926.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Ribonuclease E n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTC6_GRABC rbh
SCNpilot_cont_500_bf_scaffold_2916_18
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17094..17273
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D465D5
hypothetical protein; K09862 hypothetical protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCNpilot_cont_500_bf_scaffold_2916_trna_1
unknown

Not on your lists

17455..17527
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2916_19
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17631..18470
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMF5_9RHIZ
Membrane protein {ECO:0000313|EMBL:KFG66741.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2916_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18662..20359
DNA (1698bp) protein (566aa)
AMP-binding domain-containing protein; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
fatty acid--CoA ligase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000346F79B
Fatty-acid--CoA ligase/acetyl-coenzyme A synthetase {ECO:0000313|EMBL:GAN78452.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_2916_21
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20599..21276
DNA (678bp) protein (226aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AHJ63976.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AHJ63976.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQC1_GRABC
SCNpilot_cont_500_bf_scaffold_2916_22
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21273..21737
DNA (465bp) protein (155aa)
Molybdopterin-guanine dinucleotide biosynthesis protein MobB n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GW87_9PROT
Molybdopterin-guanine dinucleotide biosynthesis protein MobB {ECO:0000313|EMBL:EKV29512.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B
SCNpilot_cont_500_bf_scaffold_2916_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21841..22500
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FZJ7_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31029.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_2916_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22518..22781
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000368490C
molybdopterin converting factor, small subunit; K03636 molybdopterin synthase sulfur carrier subunit
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_cont_500_bf_scaffold_2916_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22794..23261
DNA (468bp) protein (156aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000360B2E9
Molybdopterin converting factor, subunit 2 {ECO:0000313|EMBL:EHL98134.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_2916_26
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23352..23840
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZG27_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB78359.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_500_bf_scaffold_2916_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24048..24494
DNA (447bp) protein (149aa)
Ketosteroid isomerase-like enzyme n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XFI8_RHILT
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:EJB07881.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2916_28
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24500..25669)
DNA (1170bp) protein (390aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
Putative DNA topoisomerase I {ECO:0000313|EMBL:KFC74290.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
SCNpilot_cont_500_bf_scaffold_2916_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25696..26127)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHI4_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97902.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying items 1-30 of 31 in total

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