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SCNpilot_cont_500_bf_scaffold_2993

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2993_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..554
DNA (552bp) protein (184aa)
D-amino-acid transaminase {ECO:0000313|EMBL:EFH10571.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EFH10571.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
D-amino acid aminotransferase (EC:2.6.1.21); K00824 D-alanine transaminase [EC:2.6.1.21]
D-amino-acid transaminase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQ45_9PROT
SCNpilot_cont_500_bf_scaffold_2993_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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581..1531
DNA (951bp) protein (317aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured Chloroflexi bacterium HF0200_06I16 RepID=E0XTZ6_9CHLR
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2993_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1607..3187
DNA (1581bp) protein (527aa)
Flp pilus assembly protein TadD n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VY09_9BRAD rbh
Flp pilus assembly protein TadD {ECO:0000313|EMBL:EJN11167.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2993_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3168..4211)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ7_GRABC
Uncharacterized protein {ECO:0000313|EMBL:AHJ61947.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2993_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4242..4994)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000382D1AA
Uncharacterized protein {ECO:0000313|EMBL:ETX02580.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2993_6
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5009..5497)
DNA (489bp) protein (163aa)
Putative regulator protein n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HE67_GLUDA
putative Fur family ferric uptake regulator; K09823 Fur family transcriptional regulator, zinc uptake regulator
Putative ferric uptake regulator, Fur family {ECO:0000313|EMBL:ACI51719.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_2993_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5543..6022
DNA (480bp) protein (160aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hisL; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000360DA3F
SCNpilot_cont_500_bf_scaffold_2993_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5967..7109
DNA (1143bp) protein (381aa)
CobW/P47K family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRZ7_9PROT rbh
CobW/P47K family protein {ECO:0000313|EMBL:EFH09923.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
cobalamin synthesis protein/P47K
SCNpilot_cont_500_bf_scaffold_2993_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7170..8306
DNA (1137bp) protein (379aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Lipid-A-disaccharide synthase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUI7_ACICJ
SCNpilot_cont_500_bf_scaffold_2993_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8636..10087)
DNA (1452bp) protein (484aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A94006
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2993_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10289..13327)
DNA (3039bp) protein (1013aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase (NADH) large subunit n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2X0_SPHWW
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 11 items

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