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SCNpilot_cont_500_bf_scaffold_9512

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9512_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(311..1297)
DNA (987bp) protein (329aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIP7_9PROT rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH12828.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_9512_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1300..2154)
DNA (855bp) protein (285aa)
Putative spermidine/putrescine ABC transporter permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDR0_AZOL4
Putative spermidine/putrescine ABC transporter; permease component; K02053 putative spermidine/putrescine transport system permease protein
Putative spermidine/putrescine ABC transporter permease component {ECO:0000313|EMBL:CBS89685.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_9512_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2151..3089)
DNA (939bp) protein (313aa)
Putative spermidine/putrescine ABC transporter permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQZ8_AZOBR
putative spermidine/putrescine ABC transporter; permease component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9512_4
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3086..4168)
DNA (1083bp) protein (361aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F75E9C rbh
monooxygenase RutA in pyrimidine catabolism pathway
SCNpilot_cont_500_bf_scaffold_9512_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4185..4652)
DNA (468bp) protein (156aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KX92_9RHIZ
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EJJ25822.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
spermidine/putrescine ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_9512_6
unknown

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4847..5089
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9512_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5772..8027)
DNA (2256bp) protein (752aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C0DB9
Cation transporter {ECO:0000313|EMBL:KFA93155.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
copper-exporting ATPase
SCNpilot_cont_500_bf_scaffold_9512_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8145..8918
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EKE78869.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EKE78869.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7M1_9PROT
SCNpilot_cont_500_bf_scaffold_9512_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9006..9407
DNA (402bp) protein (134aa)
rhodanese n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EBD8BB
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44614.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
rhodanese domain-containing protein
SCNpilot_cont_500_bf_scaffold_9512_10
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9555..10118
DNA (564bp) protein (188aa)
Chloramphenicol phosphotransferase family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HMA5_GLUDA
chloramphenicol phosphotransferase
Chloramphenicol phosphotransferase family protein {ECO:0000313|EMBL:ACI50379.1}; Putative chloramphenicol 3-O phosphotransferase {ECO:0000313|EMBL:CAP56283.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_9512_11
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10080..10700)
DNA (621bp) protein (207aa)
LysR family transcriptional regulator n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3X1_9PROT rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EGX99764.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
transcriptional regulator, LysR family rbh
Displaying 11 items

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