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SCNpilot_cont_500_bf_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_357_1
bacterium YEK0313, Bacteria

Not on your lists

comp(240..1565)
DNA (1326bp) protein (442aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Class III aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN8_9BURK
Beta-phenylalanine transaminase {ECO:0000313|EMBL:CEJ10236.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_357_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1697..2212
DNA (516bp) protein (172aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Adenine phosphoribosyltransferase n=3 Tax=Acidiphilium RepID=APT_ACICJ
SCNpilot_cont_500_bf_scaffold_357_3
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2285..2968)
DNA (684bp) protein (228aa)
UPI0003D01D49 related cluster n=1 Tax=unknown RepID=UPI0003D01D49
Uncharacterized protein {ECO:0000313|EMBL:ESZ33949.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_357_4
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3054..4031
DNA (978bp) protein (326aa)
Multidrug transporter n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F1C9_9RHIZ
Multidrug transporter {ECO:0000313|EMBL:ESX85788.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_357_5
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4031..5101
DNA (1071bp) protein (357aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J3I8_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO96031.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCNpilot_cont_500_bf_scaffold_357_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5098..5994
DNA (897bp) protein (299aa)
hypothetical protein; K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J3C1Z6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB95445.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
SCNpilot_cont_500_bf_scaffold_357_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6053..6574
DNA (522bp) protein (174aa)
Integral membrane protein-like protein n=3 Tax=Acidiphilium RepID=A5G1G0_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:GAN77060.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_357_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6676..8151
DNA (1476bp) protein (492aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] rbh
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCR5_METS4 rbh
SCNpilot_cont_500_bf_scaffold_357_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8304..10616
DNA (2313bp) protein (771aa)
Penicillin acylase {ECO:0000313|EMBL:AHJ62830.1}; EC=3.5.1.11 {ECO:0000313|EMBL:AHJ62830.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
penicillin acylase (EC:3.5.1.11); K01434 penicillin amidase [EC:3.5.1.11] rbh
Penicillin acylase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTF7_GRABC rbh
SCNpilot_cont_500_bf_scaffold_357_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10613..11119
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1H2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN75964.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_357_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11116..11895
DNA (780bp) protein (260aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ate; arginyltransferase (EC:2.3.2.8); K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375AF5E rbh
SCNpilot_cont_500_bf_scaffold_357_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11892..12536
DNA (645bp) protein (215aa)
Hydrolase, NUDIX family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1L1_9PROT rbh
Hydrolase, NUDIX family {ECO:0000313|EMBL:EHM00217.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
NUDIX family hydrolase
SCNpilot_cont_500_bf_scaffold_357_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12584..16645)
DNA (4062bp) protein (1354aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037EB446
Uncharacterized protein {ECO:0000313|EMBL:GAN77815.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
triple helix repeat-containing collagen
SCNpilot_cont_500_bf_scaffold_357_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16881..17843)
DNA (963bp) protein (321aa)
YceG family protein {ECO:0000313|EMBL:EFH13273.1}; EC=4.-.-.- {ECO:0000313|EMBL:EFH13273.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
YceG family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHH1_9PROT rbh
hypothetical protein; K07082 UPF0755 protein
SCNpilot_cont_500_bf_scaffold_357_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17884..19143)
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-ACP synthase n=1 Tax=Elioraea tepidiphila RepID=UPI000375092C
SCNpilot_cont_500_bf_scaffold_357_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19170..19409)
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=ACP_GRABC
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
acpP; acyl carrier protein; K02078 acyl carrier protein
SCNpilot_cont_500_bf_scaffold_357_17
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19569..20306)
DNA (738bp) protein (246aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ABI63109.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABI63109.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
3-oxoacyl-ACP synthase n=1 Tax=Elioraea tepidiphila RepID=UPI00036A9835 rbh
SCNpilot_cont_500_bf_scaffold_357_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20321..21283)
DNA (963bp) protein (321aa)
malonyl CoA-ACP transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPZ2_GRABC rbh
Malonyl-CoA-(Acyl carrier protein) transacylase {ECO:0000313|EMBL:GAN77079.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_357_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21406..23388)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIU0_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS91638.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_357_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23877..24575
DNA (699bp) protein (233aa)
Hypothetical membrane spanning protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV53_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN78371.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_357_21
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24680..25366
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV52_GRABC
Uncharacterized protein {ECO:0000313|EMBL:AHJ62170.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_357_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25779..28064)
DNA (2286bp) protein (762aa)
tme; malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Phosphate acetyl/butyryl transferase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLE4_9PROT
Malate dehydrogenase {ECO:0000313|EMBL:GAN77733.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_357_23
unknown

Not on your lists

28275..28544
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_357_24
Helicobacter typhlonius, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28534..29775
DNA (1242bp) protein (414aa)
Uncharacterized protein {ECO:0000313|EMBL:KGL18694.1}; TaxID=76936 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter typhlonius.;"
SCNpilot_cont_500_bf_scaffold_357_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29881..30936)
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Elioraea tepidiphila RepID=UPI00037F2CF6 rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_500_bf_scaffold_357_26
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30933..32795)
DNA (1863bp) protein (621aa)
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CPG6_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_500_bf_scaffold_357_27
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32780..34570)
DNA (1791bp) protein (597aa)
NADPH-dependent glutamate synthase beta chain-like oxidoreductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QFH7_9BRAD
Glutamate synthase {ECO:0000313|EMBL:KJC38246.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
glutamate synthase small subunit
SCNpilot_cont_500_bf_scaffold_357_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34872..36209
DNA (1338bp) protein (446aa)
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KEQ2_9PROT
amidase
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_500_bf_scaffold_357_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36362..37333
DNA (972bp) protein (324aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Afipia birgiae RepID=UPI0002DD2A99
SCNpilot_cont_500_bf_scaffold_357_30
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37515..39134)
DNA (1620bp) protein (540aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Afipia birgiae RepID=UPI00031811C7
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:ETR78165.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
propionyl-CoA carboxylase
Displaying items 1-30 of 107 in total

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