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SCNpilot_cont_500_bf_scaffold_578

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_578_1
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..273
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036BE83F
Glycosyl transferase family 1 {ECO:0000313|EMBL:EQB32232.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
putative glycosyltransferase
SCNpilot_cont_500_bf_scaffold_578_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252..1343
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A68C4
Uncharacterized protein {ECO:0000313|EMBL:EHL96343.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_578_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1398..2456)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7K1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL96340.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_578_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2434..3174)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7K2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL96341.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_578_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3183..4106)
DNA (924bp) protein (308aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E5481 rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EHL96349.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_578_6
Paracoccus pantotrophus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4114..5247)
DNA (1134bp) protein (378aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Probable alcohol dehydrogenase class III n=1 Tax=Paracoccus pantotrophus RepID=Q3S8D7_PARPN rbh
Probable alcohol dehydrogenase class III {ECO:0000313|EMBL:AAZ93608.1}; TaxID=82367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus pantotrophus (Thiosphaera pantotropha).;"
SCNpilot_cont_500_bf_scaffold_578_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5400..7079
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B1805
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EDP61203.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_578_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7395..7871)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F4M4_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB44166.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_500_bf_scaffold_578_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7957..9000)
DNA (1044bp) protein (348aa)
Dihydroorotate dehydrogenase n=1 Tax=Pseudomonas putida CSV86 RepID=L1M212_PSEPU
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:EKX84994.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
dihydroorotate dehydrogenase
SCNpilot_cont_500_bf_scaffold_578_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9115..9924
DNA (810bp) protein (270aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A5Z9_9CLOT
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:ETR77088.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_500_bf_scaffold_578_11
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10039..11379)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000376DE9A rbh
mcp; methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAL75773.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_500_bf_scaffold_578_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11480..12409)
DNA (930bp) protein (310aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KJB96530.1}; EC=1.1.1.35 {ECO:0000313|EMBL:KJB96530.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.-) rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLU2_9PROT rbh
SCNpilot_cont_500_bf_scaffold_578_13
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12606..16553
DNA (3948bp) protein (1316aa)
non-ribosomal peptide synthetase modules (EC:6.3.2.-) rbh
Non-ribosomal peptide synthetase modules {ECO:0000313|EMBL:ABI61121.1}; EC=6.3.2.- {ECO:0000313|EMBL:ABI61121.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Non-ribosomal peptide synthetase modules n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVN1_GRABC rbh
SCNpilot_cont_500_bf_scaffold_578_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16585..18084
DNA (1500bp) protein (500aa)
amino acid APC transporter n=1 Tax=Kaistia granuli RepID=UPI00035D28E7
arginine/ornithine antiporter; K03758 arginine:ornithine antiporter
Arginine/ornithine antiporter {ECO:0000313|EMBL:ABJ86743.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_500_bf_scaffold_578_15
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18116..19102
DNA (987bp) protein (329aa)
D-3-phosphoglycerate dehydrogenase SerA {ECO:0000313|EMBL:KDM67314.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KDM67314.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000364C72C rbh
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
SCNpilot_cont_500_bf_scaffold_578_16
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19132..19380
DNA (249bp) protein (83aa)
Prevent-host-death family protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z2F0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM34002.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_578_17
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19370..19831
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70491.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
nucleic acid-binding protein
SCNpilot_cont_500_bf_scaffold_578_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19888..20958
DNA (1071bp) protein (357aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] rbh
GroES-like protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPB4_9PROT rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:GAN77837.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_578_19
unknown

Not on your lists

comp(21028..21288)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_578_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21510..22532
DNA (1023bp) protein (341aa)
quinone oxidoreductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Oxidoreductase, zinc-binding dehydrogenase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKX9_9PROT rbh
Oxidoreductase {ECO:0000313|EMBL:GAN77836.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_578_21
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22641..23624)
DNA (984bp) protein (328aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBS0_THET1
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:KIJ78104.1}; Flags: Fragment;; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
SCNpilot_cont_500_bf_scaffold_578_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23742..27563
DNA (3822bp) protein (1274aa)
N-methylhydantoinase A (EC:3.5.2.9); K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
Hydantoinase/oxoprolinase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXJ9_9PROT
Methylhydantoinase {ECO:0000313|EMBL:KGM31465.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_578_23
bacterium YEK0313, Bacteria

Not on your lists

27720..29309
DNA (1590bp) protein (530aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3H8_9RHIZ
OPT oligopeptide transporter protein {ECO:0000313|EMBL:CEJ15257.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptide ABC transporter
SCNpilot_cont_500_bf_scaffold_578_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29320..30591)
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000380B64D
putative histidine kinase
SCNpilot_cont_500_bf_scaffold_578_25
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30725..31735)
DNA (1011bp) protein (337aa)
alcohol dehydrogenase (EC:1.1.1.1) rbh
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F31752 rbh
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KGM32241.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_578_26
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31747..32742)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DE378 rbh
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EHM00911.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative 2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_578_27
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32842..34314
DNA (1473bp) protein (491aa)
Amidase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3K8_9PROT rbh
Amidase {ECO:0000313|EMBL:EHL98962.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_578_28
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34340..34573)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SCF5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP39780.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_578_29
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34667..35572
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SCF6_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHP39781.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_578_30
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35620..37389
DNA (1770bp) protein (590aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EFH13469.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFH13469.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
acetolactate synthase catalytic subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGV7_9PROT rbh
Displaying items 1-30 of 38 in total

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