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SCNpilot_cont_500_bf_scaffold_614

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_614_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..843)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7A5_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE96135.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_614_2
unknown

Not on your lists

1276..1866
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_614_3
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2322..3185)
DNA (864bp) protein (288aa)
Transcriptional regulator, XRE family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKT1_BEII9
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACB95120.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_614_4
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3265..4149
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFT8_9BURK rbh
NAD-dependent dehydratase {ECO:0000313|EMBL:KHS13794.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_cont_500_bf_scaffold_614_5
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4239..5630)
DNA (1392bp) protein (464aa)
succinate-semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
succinate-semialdehyde dehdyrogenase n=1 Tax=Roseomonas sp. B5 RepID=UPI00036A4A35 rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AIA45311.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
SCNpilot_cont_500_bf_scaffold_614_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5965..6951
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000373E698
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30673.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_614_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7222..7725
DNA (504bp) protein (168aa)
Cupin domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7J2_SINAD
hypothetical protein
Cupin domain-containing protein {ECO:0000313|EMBL:AGA24611.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_500_bf_scaffold_614_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7825..8808)
DNA (984bp) protein (328aa)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EFH10081.1}; EC=1.1.1.- {ECO:0000313|EMBL:EFH10081.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A6BDED
SCNpilot_cont_500_bf_scaffold_614_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8855..9949
DNA (1095bp) protein (365aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-]
malate dehydrogenase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000361A791
L-lactate dehydrogenase {ECO:0000313|EMBL:GAN78325.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_614_10
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10101..11117
DNA (1017bp) protein (339aa)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EFH10081.1}; EC=1.1.1.- {ECO:0000313|EMBL:EFH10081.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
panE; 2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRJ8_9PROT rbh
SCNpilot_cont_500_bf_scaffold_614_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11104..12102
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC56521.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Aldo/keto reductase id=4911286 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative aldoketoreductase
SCNpilot_cont_500_bf_scaffold_614_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12273..12869
DNA (597bp) protein (199aa)
Fructose-2,6-bisphosphatase n=1 Tax=Acidovorax sp. CF316 RepID=J0KL84_9BURK
Phosphoglycerate mutase {ECO:0000313|EMBL:KGM35960.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
phosphoglycerate mutase
SCNpilot_cont_500_bf_scaffold_614_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13178..14509)
DNA (1332bp) protein (444aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRJ6_GRABC
SCNpilot_cont_500_bf_scaffold_614_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14699..15298
DNA (600bp) protein (200aa)
Integral membrane protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRJ7_GRABC
Integral membrane protein TerC {ECO:0000313|EMBL:GAN76112.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_614_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15339..18821)
DNA (3483bp) protein (1161aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV65_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHM03126.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_614_16
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18818..20044)
DNA (1227bp) protein (409aa)
Ser/Thr phosphatase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV66_9PROT rbh
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EHM03127.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
DNA repair exonuclease
SCNpilot_cont_500_bf_scaffold_614_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20202..20525
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D48609
Ferredoxin {ECO:0000313|EMBL:KGY24974.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
ferredoxin
SCNpilot_cont_500_bf_scaffold_614_18
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20522..21577
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XXR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS39727.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_614_19
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21574..22281
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XQ74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS39728.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
hypothetical protein; K07045
SCNpilot_cont_500_bf_scaffold_614_20
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22290..22628
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XQ74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS39728.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_614_21
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23147..24535
DNA (1389bp) protein (463aa)
Nitrilotriacetate monooxygenase component A (EC:1.14.13.-)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003742345 rbh
Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A {ECO:0000313|EMBL:EKF41649.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_614_22
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24532..25428
DNA (897bp) protein (299aa)
ABC transporter, extracellular substrate binding protein, probably Cystine/diaminopimelate porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4J220_BIFAP
ABC transporter, extracellular substrate binding protein, probably Cystine/diaminopimelate porter
ABC transporter, extracellular substrate binding protein, probably Cystine/diaminopimelate porter {ECO:0000313|EMBL:AFU71780.1}; TaxID=1147128 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides (strain PRL2011).;"
SCNpilot_cont_500_bf_scaffold_614_23
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25425..26300
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000366007C rbh
ABC transporter permease rbh
ABC transporter permease {ECO:0000313|EMBL:EFE80431.2}; TaxID=457425 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
SCNpilot_cont_500_bf_scaffold_614_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26297..27061
DNA (765bp) protein (255aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC transporter n=1 Tax=Actinomadura atramentaria RepID=UPI00036B8568
Polar amino acid transporter ATP-binding protein {ECO:0000313|EMBL:EWM14970.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_500_bf_scaffold_614_25
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27326..28483
DNA (1158bp) protein (386aa)
Aminotransferase {ECO:0000313|EMBL:CCD96732.1}; EC=2.6.1.- {ECO:0000313|EMBL:CCD96732.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
putative aminotransferase (EC:2.6.1.-) rbh
Aminotransferase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SRA5_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_614_26
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28480..29166
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036F99AC
Uncharacterized protein {ECO:0000313|EMBL:EHL97681.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_614_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29277..30302
DNA (1026bp) protein (342aa)
L-asparaginase, thermolabile {ECO:0000313|EMBL:EFH12338.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EFH12338.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
L-asparaginase, thermolabile n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RK29_9PROT
L-asparaginase II
SCNpilot_cont_500_bf_scaffold_614_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30676..31716)
DNA (1041bp) protein (347aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase LigC n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TBW2_9RHIZ rbh
Putative DNA ligase {ECO:0000313|EMBL:GAO39636.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_cont_500_bf_scaffold_614_29
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31758..32246)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUX8_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:KJB92676.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_614_30
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32391..33470
DNA (1080bp) protein (360aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3J6_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EIM30788.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ribonuclease BN; K07058 membrane protein rbh
Displaying items 1-30 of 64 in total

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