ggKbase home page

SCNpilot_cont_500_bf_scaffold_695

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_695_1
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..926
DNA (924bp) protein (308aa)
Beta-lactamase domain protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THD9_9BRAD rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:CCE05877.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
beta-lactamase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_695_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..2851
DNA (1647bp) protein (549aa)
metal-dependent hydrolase (EC:3.-.-.-); K07021 rbh
Metal-dependent hydrolase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSL8_GRABC rbh
Metal dependent hydrolase {ECO:0000313|EMBL:GAN77477.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_695_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2911..3177
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A8E2E
Uncharacterized protein {ECO:0000313|EMBL:GAN77476.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_695_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3639..4958
DNA (1320bp) protein (440aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01570}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
proS; prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
Prolyl-tRNA synthetase n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HRR5_GLUDA rbh
SCNpilot_cont_500_bf_scaffold_695_5
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5201..6268
DNA (1068bp) protein (356aa)
Lipoprotein releasing system transmembrane protein lolE n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSM1_GRABC
lipoprotein releasing system transmembrane protein lolE; K09808 lipoprotein-releasing system permease protein
Lipoprotein releasing system transmembrane protein lolE {ECO:0000313|EMBL:ABI62181.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_695_6
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6308..6454
DNA (147bp) protein (49aa)
Lipoprotein releasing system transmembrane protein lolE n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSM1_GRABC
lipoprotein releasing system transmembrane protein lolE; K09808 lipoprotein-releasing system permease protein
Lipoprotein releasing system transmembrane protein lolE {ECO:0000313|EMBL:ABI62181.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_695_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6447..7124
DNA (678bp) protein (226aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter-like protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E65DE0
SCNpilot_cont_500_bf_scaffold_695_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7137..8195)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003709FFB rbh
F420-dependent oxidoreductase, luciferase-like protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_695_9
unknown

Not on your lists

comp(8261..8530)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_695_10
unknown

Not on your lists

comp(8540..9448)
DNA (909bp) protein (303aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_695_11
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9531..10268)
DNA (738bp) protein (246aa)
oxidoreductase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5BA4D
fabG3; 3-ketoacyl-ACP reductase
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_695_12
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10512..10799
DNA (288bp) protein (96aa)
Hypothetical secreted protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQZ4_GRABC
hypothetical protein
Hypothetical secreted protein {ECO:0000313|EMBL:ABI62758.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_695_13
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10824..11105
DNA (282bp) protein (94aa)
OmpA family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU71_GRABC
ompA family protein
OmpA family protein {ECO:0000313|EMBL:ABI61631.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_695_14
unknown

Not on your lists

comp(11227..11418)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_695_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11490..12356)
DNA (867bp) protein (289aa)
senescence marker protein-30 n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003773496
Gluconolaconase {ECO:0000313|EMBL:KGM36000.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
senescence marker protein-30
SCNpilot_cont_500_bf_scaffold_695_16
bacterium YEK0313, Bacteria

Not on your lists

comp(12400..13989)
DNA (1590bp) protein (530aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A381_9PROT
Glutathione-binding protein GsiB {ECO:0000313|EMBL:CEJ14146.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_695_17
unknown

Not on your lists

14159..14824
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000377C0EE
SCNpilot_cont_500_bf_scaffold_695_18
unknown

Not on your lists

comp(14803..14913)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_695_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14921..15262)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWM3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63124.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_695_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15259..15957)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D86308
RES domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_500_bf_scaffold_695_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15957..16397)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSD3_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV34646.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_cont_500_bf_scaffold_695_22
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16518..17144
DNA (627bp) protein (209aa)
kdgA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJV6_9PROT
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EFH12419.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_500_bf_scaffold_695_23
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17144..18070
DNA (927bp) protein (309aa)
Kinase, PfkB family {ECO:0000313|EMBL:EFH12420.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EFH12420.1};; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Kinase, PfkB family (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJV7_9PROT
ribokinase domain-containing protein
SCNpilot_cont_500_bf_scaffold_695_24
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18320..19120)
DNA (801bp) protein (267aa)
bacA; UDP pyrophosphate phosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
UDP pyrophosphate phosphatase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036BC784
SCNpilot_cont_500_bf_scaffold_695_25
unknown

Not on your lists

comp(19124..19285)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_695_26
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19496..19975
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E56B3D
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDP50553.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative acetyltransferase
SCNpilot_cont_500_bf_scaffold_695_27
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19988..20749)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ES40_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52255.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_695_28
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20765..21832)
DNA (1068bp) protein (356aa)
N5,N10-methylenetetrahydromethanopterin reductase protein id=3680040 bin=GWA2_Elusimicrobia_69_24 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_500_bf_scaffold_695_29
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21876..22433)
DNA (558bp) protein (186aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
superoxide dismutase; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2IWU8_9PSED
SCNpilot_cont_500_bf_scaffold_695_30
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22546..23574
DNA (1029bp) protein (343aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U196_9PROT
Displaying items 1-30 of 86 in total

View Taxonomy