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SCNpilot_cont_500_bf_scaffold_712

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_712_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1240
DNA (1239bp) protein (413aa)
transposase IS4 n=1 Tax=Rhizobium leguminosarum RepID=UPI000378E36F
Transposase family protein {ECO:0000313|EMBL:EJC73710.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
IS4 insertion sequence transposase protein
SCNpilot_cont_500_bf_scaffold_712_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1355..2116
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI000169E4BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA53703.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_cont_500_bf_scaffold_712_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2109..3212)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036613EC
Uncharacterized protein {ECO:0000313|EMBL:GAN76338.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_712_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3219..4772)
DNA (1554bp) protein (518aa)
TPR repeat protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICN1_AZOC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN76337.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_712_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4839..5900)
DNA (1062bp) protein (354aa)
Putative Luciferase-like monooxygenase n=1 Tax=uncultured marine microorganism HF4000_005H07 RepID=B3T0E3_9ZZZZ
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_712_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5933..7645)
DNA (1713bp) protein (571aa)
Amidohydrolase 3 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK5_PARL1 rbh
amidohydrolase 3 rbh
Amidohydrolase 3 {ECO:0000313|EMBL:ABS64288.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_712_7
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7771..8670
DNA (900bp) protein (300aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (2,4-D dioxygenase) {ECO:0000313|EMBL:CCE07712.1}; EC=1.14.11.17 {ECO:0000313|EMBL:CCE07712.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC:1.14.11.17); K06912 alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase [EC:1.14.11.-]
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (2,4-D dioxygenase) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMM4_9BRAD
SCNpilot_cont_500_bf_scaffold_712_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8674..9465
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J0Y5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10705.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_712_9
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9702..10421)
DNA (720bp) protein (240aa)
Putative short-chain alcohol dehydrogenase n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AMZ2_BURM1
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJR63860.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
short-chain alcohol dehydrogenase
SCNpilot_cont_500_bf_scaffold_712_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10550..11476
DNA (927bp) protein (309aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKC6_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:KGM34727.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_712_11
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11495..13726)
DNA (2232bp) protein (744aa)
Putative glycosyltransferase n=1 Tax=Burkholderia sp. MSMB175 RepID=G3FND6_9BURK rbh
Glycosyl transferase {ECO:0000313|EMBL:KDP87526.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
glycosyl transferases group 1 family protein rbh
SCNpilot_cont_500_bf_scaffold_712_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13928..14809)
DNA (882bp) protein (294aa)
Ribonuclease BN n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7L9_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KIZ44369.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ribonuclease BN; K07058 membrane protein
SCNpilot_cont_500_bf_scaffold_712_13
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14985..16097)
DNA (1113bp) protein (371aa)
Opine oxidase subunit B n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZQA9_9PROT rbh
Opine oxidase subunit B {ECO:0000313|EMBL:EKN01431.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
FAD dependent oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_712_14
bacterium YEK0313, Bacteria

Not on your lists

comp(16300..17793)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000305CA10
Acylamidase {ECO:0000313|EMBL:CEJ10161.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
amidase rbh
SCNpilot_cont_500_bf_scaffold_712_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17825..19423)
DNA (1599bp) protein (533aa)
gamma-glutamyltranspeptidase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltranspeptidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BT37_GRABC rbh
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:GAN78255.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_712_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19554..19895
DNA (342bp) protein (114aa)
Export-related chaperone CsaA n=3 Tax=Acidiphilium RepID=A5G257_ACICJ
csaA; export-related chaperone CsaA; K06878 tRNA-binding protein
Export-related chaperone CsaA {ECO:0000313|EMBL:BAJ82425.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_712_17
unknown

Not on your lists

comp(19958..20656)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_712_18
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20946..22331)
DNA (1386bp) protein (462aa)
putative sugar nucleotidyltransferase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
HAD superfamily hydrolase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X1T9_9RHIZ rbh
HAD family hydrolase {ECO:0000313|EMBL:GAN51949.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
SCNpilot_cont_500_bf_scaffold_712_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22276..23622)
DNA (1347bp) protein (449aa)
Magnesium and cobalt efflux protein corC-like protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTH7_GRABC rbh
Hemolysin/magnesium/cobalt transporter CorC/HlyC {ECO:0000313|EMBL:GAN78035.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
magnesium and cobalt efflux protein corC-like protein; K03699 putative hemolysin rbh
SCNpilot_cont_500_bf_scaffold_712_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23956..24399
DNA (444bp) protein (148aa)
Putative transcriptional regulator protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H0C0_GLUDA
Transcriptional regulator Ros/MucR {ECO:0000313|EMBL:GAN78530.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
mucR; transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_712_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24577..25374)
DNA (798bp) protein (266aa)
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:CCE06571.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCE06571.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
enoyl-CoA hydratase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Putative enoyl-CoA hydratase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJD3_9BRAD
SCNpilot_cont_500_bf_scaffold_712_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25568..26293
DNA (726bp) protein (242aa)
Metallophosphoesterase id=1937570 bin=GWD2_Deltaproteobacteria_55_8 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCNpilot_cont_500_bf_scaffold_712_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26514..27341)
DNA (828bp) protein (276aa)
Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A604_9PROT
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EHL97316.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_712_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27338..28246)
DNA (909bp) protein (303aa)
Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A605_9PROT rbh
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EHL97317.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
phosphonate ABC transporter inner membrane protein; K02042 phosphonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_712_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28252..29220)
DNA (969bp) protein (323aa)
Putative phosphonate ABC transporter, periplasmic phosphonate binding protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6U6_9PROT rbh
Putative phosphonate ABC transporter, periplasmic phosphonate binding protein {ECO:0000313|EMBL:EHL96819.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
phnD; ABC transporter, phosphonate, periplasmic substrate-binding protein phnD; K02044 phosphonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_712_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29489..30106
DNA (618bp) protein (206aa)
Glutathione S-transferase domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXS6_PARL1
glutathione S-transferase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_500_bf_scaffold_712_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30112..31017
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXN1_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_cont_500_bf_scaffold_712_28
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31019..31783)
DNA (765bp) protein (255aa)
Diguanylate phosphodiesterase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TM11_ACIAC
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KHO64059.1}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
diguanylate phosphodiesterase
SCNpilot_cont_500_bf_scaffold_712_29
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32059..34125
DNA (2067bp) protein (689aa)
Cyclic nucleotide-binding protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IC06_METNO rbh
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45106.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
cyclic nucleotide-binding protein rbh
SCNpilot_cont_500_bf_scaffold_712_30
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34132..34914)
DNA (783bp) protein (261aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R253_9RHOB
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:KHQ51280.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
potI; putative putrescine transport system, permease protein PotI
Displaying items 1-30 of 34 in total

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