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SCNpilot_cont_500_bf_scaffold_747

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_747_1
unknown

Not on your lists

comp(1..1902)
DNA (1902bp) protein (634aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_747_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2124..3191
DNA (1068bp) protein (356aa)
myo-inositol-1-phosphate synthase protein (EC:5.5.1.4) rbh
Myo-inositol-1-phosphate synthase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S528_RHIET rbh
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:KJB96875.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_cont_500_bf_scaffold_747_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3191..3775
DNA (585bp) protein (195aa)
Fructose-2,6-bisphosphatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLX3_9RHIZ
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EIM24965.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative phosphoglycerate
SCNpilot_cont_500_bf_scaffold_747_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..4661)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003746347 rbh
TPR repeat protein rbh
TPR repeat protein {ECO:0000313|EMBL:BAI95938.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_cont_500_bf_scaffold_747_5
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4737..5966
DNA (1230bp) protein (410aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DC86_PSEFL
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
nhaA; pH-dependent sodium/proton antiporter; K03313 Na+:H+ antiporter, NhaA family
SCNpilot_cont_500_bf_scaffold_747_6
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5963..6634
DNA (672bp) protein (224aa)
Putative Haloacid dehalogenase/epoxide hydrolase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIV6_9BRAD
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:KIV71042.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
HAD family hydrolase
SCNpilot_cont_500_bf_scaffold_747_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6704..7780
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ32_METS4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACA16163.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_747_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7780..8589
DNA (810bp) protein (270aa)
Nucleotidyl transferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHT4_METNO rbh
Putative nucleotidyltransferase {ECO:0000313|EMBL:GAO39174.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
nucleotidyl transferase rbh
SCNpilot_cont_500_bf_scaffold_747_9
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8552..9346
DNA (795bp) protein (265aa)
putative 3-demethylubiquinone-9 3-O-methyltransferase; K15257 tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] rbh
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLX6_9RHIZ rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:KFG66907.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_747_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9343..10311
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5K1_RAMTT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEG92697.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_cont_500_bf_scaffold_747_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..11376
DNA (1029bp) protein (343aa)
Glycosyl transferase family 1 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTV2_9RHIZ rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:ESX82910.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_747_12
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11373..12341
DNA (969bp) protein (323aa)
Glycosyl transferase, group 1 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ35_METS4
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACA16166.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_747_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12338..13180
DNA (843bp) protein (281aa)
type 11 methyltransferase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036277FC
Uncharacterized protein {ECO:0000313|EMBL:KGM33700.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
type 11 methyltransferase
SCNpilot_cont_500_bf_scaffold_747_14
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13309..13740
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Spermophilus tridecemlineatus RepID=I3M9I7_SPETR
Uncharacterized protein {ECO:0000313|EMBL:KIF70607.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
SCNpilot_cont_500_bf_scaffold_747_15
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13830..17030
DNA (3201bp) protein (1067aa)
DEAD/DEAH box helicase; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M459_METRJ rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACB26354.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_747_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17031..18230)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0IY54_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN76693.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_747_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18376..19401)
DNA (1026bp) protein (342aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZZ1_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EIM29533.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_747_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19567..21258)
DNA (1692bp) protein (564aa)
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EHN11932.1}; EC=2.3.2.2 {ECO:0000313|EMBL:EHN11932.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Gamma-glutamyltranspeptidase n=1 Tax=Patulibacter medicamentivorans RepID=H0E323_9ACTN rbh
gamma-glutamyltranspeptidase rbh
SCNpilot_cont_500_bf_scaffold_747_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21507..22751
DNA (1245bp) protein (415aa)
Putative substrate-binding protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDX0_METNO rbh
putative substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Putative substrate-binding protein {ECO:0000313|EMBL:ACL55692.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_747_20
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22803..23450
DNA (648bp) protein (216aa)
alkB2; alpha-ketoglutarate-dependent dioxygenase alkB (EC:1.14.11.-); K03919 alkylated DNA repair protein [EC:1.14.11.-]
Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions {ECO:0000313|EMBL:ABF12127.1}; EC=1.14.11.- {ECO:0000313|EMBL:ABF12127.1};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LCJ9_RALME
SCNpilot_cont_500_bf_scaffold_747_21
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23422..24831)
DNA (1410bp) protein (470aa)
ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003788730 rbh
ATP-binding protein {ECO:0000313|EMBL:KJC53962.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_747_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25163..26014)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F4987 rbh
amidohydrolase 2; K07046
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_500_bf_scaffold_747_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26118..26546)
DNA (429bp) protein (143aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y993_NITMU
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABB74678.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_747_24
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26561..26986)
DNA (426bp) protein (142aa)
dehydrogenase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000363124C
DGPFAETKE family protein
Dgpfaetke family protein {ECO:0000313|EMBL:EEE02507.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
SCNpilot_cont_500_bf_scaffold_747_25
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27092..28306)
DNA (1215bp) protein (405aa)
UPI0003CE0678 related cluster n=1 Tax=unknown RepID=UPI0003CE0678
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDX31775.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_747_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28330..28704)
DNA (375bp) protein (125aa)
DGPFAETKE family protein n=2 Tax=Sphingomonas wittichii RepID=A5V5B0_SPHWW
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABQ67476.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_747_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28834..30510
DNA (1677bp) protein (559aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHC2_9PROT rbh
SCNpilot_cont_500_bf_scaffold_747_28
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30583..31371)
DNA (789bp) protein (263aa)
Transmembrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKN4_TISMK rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN76986.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transmembrane protein rbh
SCNpilot_cont_500_bf_scaffold_747_29
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31383..31814)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8T0_METRJ
Uncharacterized protein {ECO:0000313|EMBL:AIQ91531.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein; K07112
SCNpilot_cont_500_bf_scaffold_747_30
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31811..32233)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8S9_METRJ
Putative transmembrane protein {ECO:0000313|EMBL:AIQ91530.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein; K07112
Displaying items 1-30 of 46 in total

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