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SCNpilot_cont_500_bf_scaffold_772

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_772_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..245)
DNA (243bp) protein (81aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LR25_RHITR
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB73166.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_772_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

447..1325
DNA (879bp) protein (293aa)
6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP57_AZOBR rbh
Oxidoreductase {ECO:0000313|EMBL:EWY35902.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
6-phosphogluconate dehydrogenase NAD-binding rbh
SCNpilot_cont_500_bf_scaffold_772_3
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1499..2347
DNA (849bp) protein (283aa)
UPI0003CF2653 related cluster n=1 Tax=unknown RepID=UPI0003CF2653 rbh
Dehalogenase {ECO:0000313|EMBL:ESX90875.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
alpha/beta hydrolase fold rbh
SCNpilot_cont_500_bf_scaffold_772_4
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2447..2977
DNA (531bp) protein (177aa)
UPI0003CF0439 related cluster n=1 Tax=unknown RepID=UPI0003CF0439 rbh
Glyoxalase {ECO:0000313|EMBL:ESX90876.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
glyoxalase family protein rbh
SCNpilot_cont_500_bf_scaffold_772_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3026..3685)
DNA (660bp) protein (220aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EFH13080.1}; EC=2.8.3.- {ECO:0000313|EMBL:EFH13080.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
3-oxoacid CoA-transferase subunit B (EC:2.8.3.6); K01032 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
3-oxoadipate CoA-transferase subunit B n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DB3C05 rbh
SCNpilot_cont_500_bf_scaffold_772_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3800..4483)
DNA (684bp) protein (228aa)
3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:ESR23355.1}; EC=2.8.3.6 {ECO:0000313|EMBL:ESR23355.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
pcaI; 3-oxoadipate CoA-transferase, subunit A PcaI (EC:2.8.3.6)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E169C2 rbh
SCNpilot_cont_500_bf_scaffold_772_7
unknown

Not on your lists

4734..5207
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_772_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5218..7335)
DNA (2118bp) protein (706aa)
Acyl-CoA synthetase (EC:6.2.1.-)
CoA binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLW3_9PROT
CoA binding domain protein {ECO:0000313|EMBL:EFH11699.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_500_bf_scaffold_772_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7470..8204)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FAEF55
Sulfurase {ECO:0000313|EMBL:AJP71596.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_772_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8269..9435)
DNA (1167bp) protein (389aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUJ3_9PROT rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM03377.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
major facilitator superfamily transporter
SCNpilot_cont_500_bf_scaffold_772_11
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9453..9992)
DNA (540bp) protein (180aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFH12643.1}; EC=2.3.1.183 {ECO:0000313|EMBL:EFH12643.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
pat; phosphinothricin N-acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
Acetyltransferase, GNAT family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ76_9PROT
SCNpilot_cont_500_bf_scaffold_772_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10113..11024
DNA (912bp) protein (304aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUJ5_9PROT rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM03379.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_772_13
unknown

Not on your lists

comp(11093..11266)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_772_14
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11331..12110)
DNA (780bp) protein (260aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F492F0
Uncharacterized protein {ECO:0000313|EMBL:EIP98486.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_500_bf_scaffold_772_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12195..12743
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJH1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP66772.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
carboxymuconolactone decarboxylase
SCNpilot_cont_500_bf_scaffold_772_16
unknown

Not on your lists

comp(12713..12928)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_772_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12925..13809)
DNA (885bp) protein (295aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A150_9PROT rbh
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EHM00591.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
alpha/beta hydrolase rbh
SCNpilot_cont_500_bf_scaffold_772_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13853..14845)
DNA (993bp) protein (331aa)
Sugar ABC transporter permease protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SX9_BRADU rbh
sugar ABC transporter permease; K10440 ribose transport system permease protein rbh
Putative Ribose transport system permease protein {ECO:0000313|EMBL:KGJ67753.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_500_bf_scaffold_772_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14845..16344)
DNA (1500bp) protein (500aa)
sugar ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
Sugar ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SY0_BRADU rbh
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44857.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_772_20
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16349..17299)
DNA (951bp) protein (317aa)
Sugar-binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMX7_9PROT rbh
Sugar-binding domain protein {ECO:0000313|EMBL:EFH11342.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_772_21
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17506..17985
DNA (480bp) protein (160aa)
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9]
glutathione peroxidase n=1 Tax=Sphingomonas wittichii RepID=UPI0003009286
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
SCNpilot_cont_500_bf_scaffold_772_22
unknown

Not on your lists

18057..18278
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_772_23
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18474..20066
DNA (1593bp) protein (531aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GAV0_9BRAD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGT78584.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_772_24
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20097..21038
DNA (942bp) protein (314aa)
peptide ABC transporter n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EE9B60
ABC transporter, permease protein {ECO:0000313|EMBL:EFH10406.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_772_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21064..21969
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXB5_9PROT
ABC transporter, permease protein {ECO:0000313|EMBL:EHM02364.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_772_26
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21975..22964
DNA (990bp) protein (330aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3D9_AZOC5 rbh
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein rbh
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAF88010.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_772_27
bacterium YEK0313, Bacteria

Not on your lists

22961..23977
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000378DB60 rbh
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CEJ11507.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_772_28
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24105..24722
DNA (618bp) protein (206aa)
carbonic anhydrase family protein; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KMP9_MICAA
Carbonic anhydrase family protein {ECO:0000313|EMBL:AEP08436.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
SCNpilot_cont_500_bf_scaffold_772_29
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24924..26006
DNA (1083bp) protein (361aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUA9_PARL1 rbh
alcohol dehydrogenase rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ABS63492.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_772_30
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26344..27132
DNA (789bp) protein (263aa)
Signal peptide peptidase sppA {ECO:0000313|EMBL:AHJ62276.1}; EC=3.4.21.- {ECO:0000313|EMBL:AHJ62276.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
signal peptide peptidase sppA (EC:3.4.21.-); K01362 [EC:3.4.21.-]
Signal peptide peptidase sppA n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUV0_GRABC
Displaying items 1-30 of 40 in total

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