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SCNpilot_cont_500_bf_scaffold_1067

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1067_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1..258
DNA (258bp) protein (86aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase large subunit n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7L4_9BURK
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_cont_500_bf_scaffold_1067_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

314..1240
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003811F46
Uncharacterized protein {ECO:0000313|EMBL:GAN77659.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1067_3
unknown

Not on your lists

comp(1455..1634)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1067_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2044..3165)
DNA (1122bp) protein (374aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Epoxyqueuosine reductase n=1 Tax=Acidiphilium sp. PM RepID=F7S805_9PROT rbh
putative iron-sulfur cluster-binding protein
SCNpilot_cont_500_bf_scaffold_1067_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3263..3730)
DNA (468bp) protein (156aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" s
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Elioraea tepidiphila RepID=UPI00037599B3
SCNpilot_cont_500_bf_scaffold_1067_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3727..4851)
DNA (1125bp) protein (375aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
queuine/archaeosine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030867EE rbh
SCNpilot_cont_500_bf_scaffold_1067_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4848..5966)
DNA (1119bp) protein (373aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Gluconacetobacter diazotrophicus RepID=UPI000173D000 rbh
SCNpilot_cont_500_bf_scaffold_1067_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5966..6547)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRW3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH09953.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1067_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6570..6968)
DNA (399bp) protein (133aa)
Lactoylglutathione lyase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVG6_GRABC
lactoylglutathione lyase family protein
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:AHJ62048.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_cont_500_bf_scaffold_1067_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7335..8981)
DNA (1647bp) protein (549aa)
fumarate hydratase (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] rbh
fumarate hydratase n=1 Tax=Elioraea tepidiphila RepID=UPI000365D59A rbh
Fumarate hydratase {ECO:0000313|EMBL:GAN76772.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1067_11
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9012..9542)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031B3E50
Uncharacterized protein {ECO:0000313|EMBL:GAJ29520.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein; K09985 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1067_12
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9661..10887
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BEC9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPZ42378.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
mdtG; major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_1067_13
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11128..11904)
DNA (777bp) protein (259aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT74_PSEUX
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:KID27946.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
alpha/beta hydrolase
SCNpilot_cont_500_bf_scaffold_1067_14
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11901..13136)
DNA (1236bp) protein (412aa)
Flavin-dependent oxidoreductase n=2 Tax=Sphingomonadaceae RepID=Q1NCY0_9SPHN
Oxidoreductase {ECO:0000313|EMBL:EQB12238.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
luciferase-like protein rbh
SCNpilot_cont_500_bf_scaffold_1067_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13223..13606)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHE9_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69495.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1067_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13672..14508)
DNA (837bp) protein (279aa)
Esterase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8INK6_AZOC5 rbh
esterase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1067_17
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14505..15377)
DNA (873bp) protein (291aa)
Polysaccharide deacetylase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJB8_METS4 rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ACA14968.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_1067_18
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15511..16323
DNA (813bp) protein (271aa)
Xylose isomerase domain-containing protein n=1 Tax=Thauera sp. 63 RepID=N6YC15_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:AJE22815.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
xylose isomerase domain-containing protein
SCNpilot_cont_500_bf_scaffold_1067_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16494..17054
DNA (561bp) protein (187aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
Probable sensor/response regulator hybrid n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V7I2_PSEA7
putative sensor/response regulator hybrid
SCNpilot_cont_500_bf_scaffold_1067_20
unknown

Not on your lists

comp(17095..17304)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1067_21
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17372..18685)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037724F2 rbh
Na+/H+ antiporter NhaD-like permease {ECO:0000313|EMBL:EIM28393.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
citrate transporter
SCNpilot_cont_500_bf_scaffold_1067_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18687..19109)
DNA (423bp) protein (141aa)
Lactoylglutathione lyase-like lyase n=2 Tax=Singulisphaera acidiphila RepID=L0D5G5_SINAD
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGA24669.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_500_bf_scaffold_1067_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19174..20265)
DNA (1092bp) protein (364aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
adenine-specific methyltransferase (EC:2.1.1.72); K13581 modification methylase [EC:2.1.1.72] rbh
Adenine-specific methyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQZ5_GRABC rbh
SCNpilot_cont_500_bf_scaffold_1067_24
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20329..21141)
DNA (813bp) protein (271aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
ribonuclease HII n=1 Tax=Gluconacetobacter diazotrophicus RepID=UPI000173B837
SCNpilot_cont_500_bf_scaffold_1067_25
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21200..22117)
DNA (918bp) protein (306aa)
LysR family transcriptional regulator (EC:4.2.1.1)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T4M2_BURPP
LysR family transcriptional regulator {ECO:0000313|EMBL:KJS43012.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCNpilot_cont_500_bf_scaffold_1067_26
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22286..23161)
DNA (876bp) protein (292aa)
Aminomethyltransferase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQL8_GRABC
glycine cleavage system protein T; K06980
Aminomethyltransferase family protein {ECO:0000313|EMBL:ABI62884.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1067_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23241..24608
DNA (1368bp) protein (456aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] rbh
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YIW2_9PROT rbh
Dihydrolipoamide dehydrogenase/pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:GAN78525.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1067_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24696..26273
DNA (1578bp) protein (526aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZ32_9PROT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHM01750.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_1067_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26370..27779
DNA (1410bp) protein (470aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=3 Tax=Acidiphilium RepID=A5G001_ACICJ
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:GAN77802.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1067_30
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27790..28944
DNA (1155bp) protein (385aa)
hypothetical protein; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RR16_9PROT
Nicotinic acid phosphoribosyltransferase {ECO:0000313|EMBL:GAN77803.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Displaying items 1-30 of 36 in total

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