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SCNpilot_cont_500_bf_scaffold_1081

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1081_1
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32..1021)
DNA (990bp) protein (330aa)
Immunogenic protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZQ5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGM47269.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
TRAP transporter solute receptor; K07080
SCNpilot_cont_500_bf_scaffold_1081_2
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1203..1727
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QDF1_GLUHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFG84910.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
SCNpilot_cont_500_bf_scaffold_1081_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1820..2158)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036E9A09
Uncharacterized protein {ECO:0000313|EMBL:GAN77875.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1081_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2333..3673
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=AROA_GRABC rbh
SCNpilot_cont_500_bf_scaffold_1081_5
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3714..4337
DNA (624bp) protein (208aa)
cmk; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EC59F9
SCNpilot_cont_500_bf_scaffold_1081_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4722..6458
DNA (1737bp) protein (579aa)
30S ribosomal protein S1 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H459_GLUDA rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
SCNpilot_cont_500_bf_scaffold_1081_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6664..7518
DNA (855bp) protein (285aa)
signal peptide peptidase sppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-]
Signal peptide peptidase sppA n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQI3_GRABC
Signal peptide peptidase SppA {ECO:0000313|EMBL:GAN78425.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1081_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7535..7858
DNA (324bp) protein (108aa)
Integration host factor subunit beta n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=IHFB_GLUDA
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta
SCNpilot_cont_500_bf_scaffold_1081_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7875..8183
DNA (309bp) protein (103aa)
Hypothetical secreted protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQI5_GRABC
hypothetical protein
Hypothetical secreted protein {ECO:0000313|EMBL:ABI62917.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1081_10
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8224..8916
DNA (693bp) protein (231aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YZM3_9PROT
SCNpilot_cont_500_bf_scaffold_1081_11
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8913..9539
DNA (627bp) protein (209aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003722978
SCNpilot_cont_500_bf_scaffold_1081_12
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9765..10598)
DNA (834bp) protein (278aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacter
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F2758E rbh
SCNpilot_cont_500_bf_scaffold_1081_13
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10744..11499)
DNA (756bp) protein (252aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=749388 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis NBRC 101654.;"
trehalose phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose phosphatase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7V9R6_9PROT
SCNpilot_cont_500_bf_scaffold_1081_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11496..12314)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F701C5
Uncharacterized protein {ECO:0000313|EMBL:GAN76885.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1081_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12328..12549)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVS7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM02899.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1081_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12546..13133)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RN94_9PROT
ABC transporter toluene tolerance protein {ECO:0000313|EMBL:GAN76883.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1081_17
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13145..13498)
DNA (354bp) protein (118aa)
NADH:ubiquinone oxidoreductase subunit (EC:1.6.5.3); K00329 NADH dehydrogenase [EC:1.6.5.3]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D611F
NADH-ubiquinone oxidoreductase 17.2 kD subunit {ECO:0000313|EMBL:GAN76882.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1081_18
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13900..15369
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YKB8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKM99321.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1081_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15512..16165)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036F889B
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EFH13175.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
phaR; polyhydroxyalkanoate synthesis repressor PhaR
SCNpilot_cont_500_bf_scaffold_1081_20
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16527..17768
DNA (1242bp) protein (414aa)
Poly-beta-hydroxybutyrate polymerase PhbC {ECO:0000313|EMBL:KDM67143.1}; EC=2.3.1.- {ECO:0000313|EMBL:KDM67143.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
phbC; putative poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Alpha/beta hydrolase fold protein n=2 Tax=Acidiphilium RepID=F7S3Z1_9PROT
SCNpilot_cont_500_bf_scaffold_1081_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17880..18170)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVV5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM02878.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1081_22

Not on your lists

comp(18352..18846)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PUI4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH98591.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1081_23
unknown

Not on your lists

comp(18857..19396)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003746819
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1081_24
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19494..20222)
DNA (729bp) protein (243aa)
phosphohydrolase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035E8F2C
metal dependent phosphohydrolase; K06950 uncharacterized protein
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACA19592.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_1081_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20219..21355)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003664413 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN77466.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_500_bf_scaffold_1081_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21546..22943
DNA (1398bp) protein (466aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00322 NAD(P) transhydrogenase [EC:1.6.1.1] rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A375_STAND rbh
Dihydrolipoamide dehydrogenase/soluble pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:GAN76240.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1081_27
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22957..23313)
DNA (357bp) protein (119aa)
glyoxalase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000349E35B
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46510.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_1081_28
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..24324)
DNA (978bp) protein (326aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ64_9PROT rbh
SCNpilot_cont_500_bf_scaffold_1081_29
unknown

Not on your lists

24524..25078
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1081_30
unknown

Not on your lists

25093..25593
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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