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SCNpilot_cont_500_bf_scaffold_1162

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1162_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..933)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPK0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH10795.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative chaperone protein DnaK; K04046 hypothetical chaperone protein
SCNpilot_cont_500_bf_scaffold_1162_2
unknown

Not on your lists

1059..1223
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1162_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1262..1630
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CUJ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN12989.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1162_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1662..3524
DNA (1863bp) protein (621aa)
ABC transporter ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQG4_GRABC rbh
ABC transporter ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABI62938.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1162_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3862..5472)
DNA (1611bp) protein (537aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD29_9BRAD
Gamma-glutamyltransferase {ECO:0000313|EMBL:ETW94495.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCNpilot_cont_500_bf_scaffold_1162_6
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5526..6608)
DNA (1083bp) protein (361aa)
2-nitropropane dioxygenase (EC:1.13.12.16); K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
2-nitropropane dioxygenase (EC 1.13.11.32) {ECO:0000313|EMBL:CBW75093.1}; EC=1.13.12.16 {ECO:0000313|EMBL:CBW75093.1};; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
2-nitropropane dioxygenase (EC 1.13.11.32) n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AR61_BURRH rbh
SCNpilot_cont_500_bf_scaffold_1162_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6819..8015
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1D3_ACIMA rbh
hypothetical protein; K03808 paraquat-inducible protein A rbh
Putative paraquat-inducible protein A {ECO:0000313|EMBL:KDM65247.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_cont_500_bf_scaffold_1162_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8012..9721
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YSZ8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKM98213.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1162_9
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9718..10317
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037D6E40
Uncharacterized protein {ECO:0000313|EMBL:AIO37290.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
hypothetical protein; K09857 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1162_10
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10482..11510)
DNA (1029bp) protein (343aa)
GntR family transcriptional regulator n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMC6_9BURK
Transcriptional regulator GntR {ECO:0000313|EMBL:GAN79171.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1162_11
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11757..12800
DNA (1044bp) protein (348aa)
Putative spermidine/putrescine ABC transporter (Substrate binding protein) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S143_9BRAD rbh
Putative spermidine/putrescine ABC transporter (Substrate binding protein) {ECO:0000313|EMBL:CCD87920.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
spermidine/putrescine ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1162_12
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12802..13932
DNA (1131bp) protein (377aa)
Spermidine/putrescine ABC transporter, ATP-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K6R5_9RHOB
PotA protein {ECO:0000313|EMBL:BAQ50095.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1162_13
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14282..15118
DNA (837bp) protein (279aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I376_AZOC5
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ50096.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_1162_14
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15115..15906
DNA (792bp) protein (264aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I373_AZOC5
ABC transporter permease {ECO:0000313|EMBL:KJR61735.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_1162_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16031..16924
DNA (894bp) protein (298aa)
Polysaccharide deacetylase family protein, putative n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW85_9PROT
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1162_16
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16921..17583
DNA (663bp) protein (221aa)
Asp/Glu racemase; K01797 [EC:5.1.99.-]
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003742CB7
Asp/Glu racemase {ECO:0000313|EMBL:ABM38571.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_1162_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17621..19411
DNA (1791bp) protein (597aa)
Signal transduction histidine kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2D9_9RHIZ
Signal transduction histidine kinase {ECO:0000313|EMBL:EIM30381.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Hybrid sensor histidine kinase
SCNpilot_cont_500_bf_scaffold_1162_trna_1
unknown

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comp(19518..19588)
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1162_18
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19669..20346)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000378D762
Uncharacterized protein {ECO:0000313|EMBL:EFH13041.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1162_19
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20437..21405)
DNA (969bp) protein (323aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:AHJ61850.1}; EC=2.4.1.- {ECO:0000313|EMBL:AHJ61850.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC:2.4.1.-)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVZ8_GRABC
SCNpilot_cont_500_bf_scaffold_1162_20
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21427..22314)
DNA (888bp) protein (296aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
DTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AHJ61849.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AHJ61849.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVZ9_GRABC
SCNpilot_cont_500_bf_scaffold_1162_21
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22318..22869)
DNA (552bp) protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2B6_9PROT
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EKN01274.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCNpilot_cont_500_bf_scaffold_1162_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22866..23741)
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW01_GRABC
SCNpilot_cont_500_bf_scaffold_1162_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23925..24923)
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW02_GRABC
Displaying 24 items

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