name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_1232_1
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(271..1521)
|
Acetate CoA-transferase YdiF n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C735_ALCDB
probable succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like
Succinyl-CoA:3-ketoacid-coenzyme A transferase 1 {ECO:0000313|EMBL:AFT68333.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1232_2
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1612..2754
|
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0URP0_ALCFA
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC63288.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
hypothetical protein; K09788 hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_3
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2757..3581)
|
Tetratricopeptide repeat family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU98_GRABC
TPR repeat-containing protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:AHJ62495.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
|
|
SCNpilot_cont_500_bf_scaffold_1232_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3680..4528
|
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU97_GRABC
rbh
NAD dependent epimerase/dehydratase {ECO:0000313|EMBL:GAN76969.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
nucleoside-diphosphate-sugar epimerases
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4469..5239)
|
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY04_AZOS1
Hydrolase alpha/beta {ECO:0000313|EMBL:GAN76970.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1232_6
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5352..5690)
|
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000364C181
ArsR family transcriptional regulator {ECO:0000313|EMBL:KAK47045.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
ArsR family transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_1232_7
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5788..6861
|
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YV82_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS44070.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6922..8061
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000379F1DB
Glycosyl transferase {ECO:0000313|EMBL:GAN76971.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
glycosyltransferase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_9
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8138..8278
|
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1457393 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti 1023.;"
Threonine--tRNA ligase n=1 Tax=Acetobacter pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471 RepID=H1UMD5_ACEPA
|
|
SCNpilot_cont_500_bf_scaffold_1232_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8299..10008
|
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Threonine--tRNA ligase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=SYT_GRABC
|
|
SCNpilot_cont_500_bf_scaffold_1232_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10134..10655
|
Translation initiation factor IF-3 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRP1_GRABC
rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
protein translation initiation factor 3; K02520 translation initiation factor IF-3
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11009..11251)
|
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVN5_GRABC
|
|
SCNpilot_cont_500_bf_scaffold_1232_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11332..11748)
|
Histone deacetylase superfamily n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXT0_ACICJ
histone deacetylase superfamily protein
Histone deacetylase superfamily {ECO:0000313|EMBL:ABQ30412.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1232_14
unknown
|
Not on your lists |
11823..12035
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1232_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12222..12500)
|
transcriptional regulator; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
Hypothetical transcriptional regulatory protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVN6_GRABC
Two component transcriptional regulator {ECO:0000313|EMBL:GAN77798.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
|
|
SCNpilot_cont_500_bf_scaffold_1232_16
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12564..13463
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003742A53
rbh
Transcriptional repressor sugar kinase/fructokinase {ECO:0000313|EMBL:GAN79154.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
|
|
SCNpilot_cont_500_bf_scaffold_1232_17
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13479..14771
|
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
DNA polymerase IV n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKV5_9PROT
|
|
SCNpilot_cont_500_bf_scaffold_1232_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14851..17115
|
Signal transduction histidine kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2D9_9RHIZ
rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EIM30381.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
histidine kinase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_19
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
17314..18255
|
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037017F8
rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EYB67202.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
lipase/esterase
|
|
SCNpilot_cont_500_bf_scaffold_1232_20
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18358..19488)
|
Transporter n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LAZ7_9RHIZ
rbh
Transporter {ECO:0000313|EMBL:EIZ81739.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1232_21
unknown
|
Not on your lists |
comp(19485..19943)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1232_22
unknown
|
Not on your lists |
19977..20075
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1232_23
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20197..20580
|
Sigma54 specific transcriptional regulator, Fis family n=3 Tax=Desulfovibrio vulgaris RepID=A1VFM6_DESVV
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ADP85849.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
PAS/PAC sensor hybrid histidine kinase
|
|
SCNpilot_cont_500_bf_scaffold_1232_24
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20624..21343)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FC1007
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETF03988.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
|
|
SCNpilot_cont_500_bf_scaffold_1232_25
RLO_Entotheonella_69_37, Entotheonella, Bacteria
|
Not on your lists |
comp(21289..21645)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FC1007
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
|
|
SCNpilot_cont_500_bf_scaffold_1232_26
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21647..22699)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035F8163
Uncharacterized protein {ECO:0000313|EMBL:ETF04672.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
Fe3+ ABC transporter periplasmic protein FbpA/AfuA; K02012 iron(III) transport system substrate-binding protein
|
|
SCNpilot_cont_500_bf_scaffold_1232_27
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22796..24577)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EC5DFA
Uncharacterized protein {ECO:0000313|EMBL:ETF04671.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
binding-protein-dependent transporters inner membrane component; K02011 iron(III) transport system permease protein
|
|
SCNpilot_cont_500_bf_scaffold_1232_28
unknown
|
Not on your lists |
comp(24909..25280)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1232_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25511..27163
|
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B403_9RHIZ
glucose-6-phosphate 1-dehydrogenase
|
|
SCNpilot_cont_500_bf_scaffold_1232_30
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27288..28982)
|
Methyl-accepting chemotaxis protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMS9_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC61372.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
chemotaxis sensory transducer protein
|