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SCNpilot_cont_500_bf_scaffold_1302

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1302_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1302_2
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70..342)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000371A551
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:GAN55793.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_cont_500_bf_scaffold_1302_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356..670)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EC0EA3
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellar hook-basal body protein FleE
SCNpilot_cont_500_bf_scaffold_1302_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(667..1074)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036EED44
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
protein FlgC
SCNpilot_cont_500_bf_scaffold_1302_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1103..1612)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F7C78
Putative flagellar basal-body rod protein FlgB {ECO:0000313|EMBL:EFH11656.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
SCNpilot_cont_500_bf_scaffold_1302_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1621..1887
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQI1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78262.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1302_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1884..2279
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E190BD
Uncharacterized protein {ECO:0000313|EMBL:GAN78261.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1302_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2276..3139
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362741B rbh
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:GAN78260.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP rbh
SCNpilot_cont_500_bf_scaffold_1302_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3276..3761)
DNA (486bp) protein (162aa)
Cro/Cl family transcriptional regulator n=1 Tax=Elioraea tepidiphila RepID=UPI000380109F
Transcriptional regulator XRE {ECO:0000313|EMBL:GAN77061.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1302_10
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3927..5525)
DNA (1599bp) protein (533aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV62_GRABC
SCNpilot_cont_500_bf_scaffold_1302_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5494..6288)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375CE40 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN76854.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1302_12
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6327..6851)
DNA (525bp) protein (175aa)
Fur family transcriptional regulator n=1 Tax=Acetobacter aceti RepID=UPI00022608B6
Transcriptional regulator for ferric uptake {ECO:0000313|EMBL:GAN56514.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
ferric uptake regulation protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_cont_500_bf_scaffold_1302_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6994..7398)
DNA (405bp) protein (135aa)
Putative transcriptional regulatory protein, Ros/MucR family n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FT78_PHAMO
Transcriptional regulator Ros/MucR {ECO:0000313|EMBL:GAN78530.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transcriptional regulatory protein Ros
SCNpilot_cont_500_bf_scaffold_1302_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7551..7739
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RU70_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH09149.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SirA family protein
SCNpilot_cont_500_bf_scaffold_1302_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7873..8394)
DNA (522bp) protein (174aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase, putative {ECO:0000313|EMBL:ACI99990.1}; EC=2.3.1.128 {ECO:0000313|EMBL:ACI99990.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Ribosomal-protein-alanine acetyltransferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUQ9_RHOCS
SCNpilot_cont_500_bf_scaffold_1302_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8391..9053)
DNA (663bp) protein (221aa)
Peptidase M22 family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZF7_ACIMA
peptidase M22 family protein
Peptidase M22 family protein {ECO:0000313|EMBL:BAJ81167.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_1302_17
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9103..9690)
DNA (588bp) protein (196aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase Asru_0225_03 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Putative NADH dehydrogenase/NAD(P)H nitroreductase HMPREF0731_1640 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKN0_9PROT
SCNpilot_cont_500_bf_scaffold_1302_18
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10025..10588)
DNA (564bp) protein (188aa)
Fe-S cluster assembly protein NFU n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVV4_GRABC
Fe-S cluster assembly protein NFU
Fe-S cluster assembly protein NFU {ECO:0000313|EMBL:ABI61048.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1302_19
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10795..11616
DNA (822bp) protein (274aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] rbh
Endonuclease III (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1K1_9PROT rbh
Endonuclease III {ECO:0000313|EMBL:EHM00232.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_1302_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11866..12159)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT89_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN77332.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1302_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12273..13310)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E0A4C7
Uncharacterized protein {ECO:0000313|EMBL:EHL97278.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1302_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13470..14231)
DNA (762bp) protein (254aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
Acyltransferase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A654_9PROT
Acyltransferase {ECO:0000313|EMBL:EHL97280.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_1302_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14228..14971)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVX1_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN78305.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1302_24
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14968..15942)
DNA (975bp) protein (325aa)
Cell division protein ftsX n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVX2_GRABC
Cell division protein ftsX {ECO:0000313|EMBL:AHJ61881.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
cell division protein ftsX; K09811 cell division transport system permease protein
SCNpilot_cont_500_bf_scaffold_1302_25
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16054..16731)
DNA (678bp) protein (226aa)
Cell division ATP-binding protein ftsE n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVX3_GRABC rbh
cell division ATP-binding protein ftsE; K09812 cell division transport system ATP-binding protein rbh
Cell division ATP-binding protein ftsE {ECO:0000313|EMBL:AHJ61880.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_cont_500_bf_scaffold_1302_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17004..17393
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FA03B1
Uncharacterized protein {ECO:0000313|EMBL:AIF48047.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
copper resistance protein CopC; K07156
SCNpilot_cont_500_bf_scaffold_1302_27
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17397..19061
DNA (1665bp) protein (555aa)
Copper resistance protein D n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW60_GRABC rbh
copper resistance protein D; K07245 putative copper resistance protein D rbh
Copper resistance protein D {ECO:0000313|EMBL:ABI60942.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1302_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19116..19874)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035FBE2E
ywbO; DSBA oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1302_29
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19976..20884)
DNA (909bp) protein (303aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Putative phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ABQ35007.1}; EC=1.1.1.95 {ECO:0000313|EMBL:ABQ35007.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative phosphoglycerate dehydrogenase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EFR3_BRASB
SCNpilot_cont_500_bf_scaffold_1302_30
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21161..21622)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMD5_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC98397.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Displaying items 1-30 of 32 in total

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