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SCNpilot_cont_500_bf_scaffold_1350

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1350_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..792
DNA (792bp) protein (264aa)
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:ACI98687.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACI98687.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
peptidase S41 n=1 Tax=Methyloferula stellata RepID=UPI00036E3DC0
SCNpilot_cont_500_bf_scaffold_1350_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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797..1513
DNA (717bp) protein (239aa)
ccoO; cytochrome c oxidase, cbb3-type subunit II (EC:1.9.3.1); K00405 cytochrome c oxidase cbb3-type subunit II
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000372470E rbh
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EGX99999.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_500_bf_scaffold_1350_3
unknown

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1526..1678
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1350_4
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1691..2560
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036FFC8B
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
cbb3-type cytochrome c oxidase subunit III; K00406 cytochrome c oxidase cbb3-type subunit III
SCNpilot_cont_500_bf_scaffold_1350_5
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2576..3499
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000367A10C
Nitrogen fixation protein FixG {ECO:0000313|EMBL:KJV10512.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
fixG; nitrogen fixation protein fixG
SCNpilot_cont_500_bf_scaffold_1350_6
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3619..4017
DNA (399bp) protein (133aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoG n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H256_9PROT
Type cbb3 cytochrome oxidase biogenesis protein CcoG {ECO:0000313|EMBL:EKV32370.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
4Fe-4S ferredoxin
SCNpilot_cont_500_bf_scaffold_1350_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4023..4520
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000379F74E
fixH; nitrogen fixation protein fixH
Nitrogen fixation protein fixH, putative {ECO:0000313|EMBL:ACI98682.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_500_bf_scaffold_1350_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4532..6937
DNA (2406bp) protein (802aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035E1DDF rbh
Cation transport ATPase {ECO:0000313|EMBL:EKE78713.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
fixI; cation-exporting ATPase rbh
SCNpilot_cont_500_bf_scaffold_1350_9
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6934..7080
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXP0_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KJV09014.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1350_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7242..8708)
DNA (1467bp) protein (489aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
glpD; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D5B65 rbh
SCNpilot_cont_500_bf_scaffold_1350_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8705..9421)
DNA (717bp) protein (239aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHC1_9RHOB
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EJW13366.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1350_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9537..10931)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000315AE0E
Uncharacterized protein {ECO:0000313|EMBL:GAN78073.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative Peptidase, M20/M25/M40 family
SCNpilot_cont_500_bf_scaffold_1350_13
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10976..11602)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS47_GRABC
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AHJ63349.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1350_14
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11724..12989
DNA (1266bp) protein (422aa)
primase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035EAEA8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB63425.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
SCNpilot_cont_500_bf_scaffold_1350_15
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12992..14518
DNA (1527bp) protein (509aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Acidiphilium sp. PM RepID=F7S6J9_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB63426.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_cont_500_bf_scaffold_1350_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14550..16097
DNA (1548bp) protein (516aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IF81_BEII9 rbh
Secretion system type I outer membrane RND efflux pump lipoprotein NodT {ECO:0000313|EMBL:GAN78072.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
RND efflux system outer membrane lipoprotein rbh
SCNpilot_cont_500_bf_scaffold_1350_17
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16235..17482
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DCBE4F
Uncharacterized protein {ECO:0000313|EMBL:EFG84431.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1350_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17558..18322
DNA (765bp) protein (255aa)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A873_9PROT
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EHL96040.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
WecB/TagA/CpsF family glycosyl transferase
SCNpilot_cont_500_bf_scaffold_1350_19
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18309..19394)
DNA (1086bp) protein (362aa)
Glycosyl transferase, family 2 n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUL9_ACICJ
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KDM68620.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_cont_500_bf_scaffold_1350_20
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19394..20548)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035CBC44 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIB12769.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
family 2 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_1350_21
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20561..21298)
DNA (738bp) protein (246aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4S0_FRAAD
undecaprenyl-phosphate glucose phosphotransferase
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:AFC84993.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_500_bf_scaffold_1350_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21481..21936)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS56_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN78235.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1350_23
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22009..22941)
DNA (933bp) protein (311aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP76_9PROT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFH10896.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_1350_24
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22944..23831)
DNA (888bp) protein (296aa)
Inner-membrane translocator n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IX03_METNO
ABC transporter amide-urea permease {ECO:0000313|EMBL:GAN76944.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
inner-membrane translocator
SCNpilot_cont_500_bf_scaffold_1350_25
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23865..25088)
DNA (1224bp) protein (408aa)
Substrate-binding protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YWY5_9RHIZ
Substrate-binding protein {ECO:0000313|EMBL:EMS41004.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
putative substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1350_26
unknown

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comp(25106..25417)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1350_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25595..26290)
DNA (696bp) protein (232aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP73_9PROT
ABC transporter {ECO:0000313|EMBL:GAN78526.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1350_28
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26283..27035)
DNA (753bp) protein (251aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP72_9PROT
ABC transporter {ECO:0000313|EMBL:GAN78527.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1350_29
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27646..29214
DNA (1569bp) protein (523aa)
Type I secretion outer membrane protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSJ2_GRABC
type I secretion outer membrane protein
Type I secretion outer membrane protein {ECO:0000313|EMBL:ABI62210.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1350_30
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29371..30633
DNA (1263bp) protein (421aa)
Acriflavin resistance periplasmic protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSJ1_GRABC rbh
Multidrug resistance efflux pump acriflavin resistance protein HlyD/AcrB/AcrD/AcrF {ECO:0000313|EMBL:GAN76159.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
acriflavin resistance periplasmic protein; K07799 putative multidrug efflux transporter MdtA rbh
Displaying items 1-30 of 32 in total

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