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SCNpilot_cont_500_bf_scaffold_1552

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1552_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1396)
DNA (1395bp) protein (465aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Thiamine pyrophosphate binding domain-containing protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XV47_9RHIZ rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_500_bf_scaffold_1552_2
unknown

Not on your lists

1500..1868
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1552_3
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1921..2727
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUG3_9BRAD
Membrane protein {ECO:0000313|EMBL:KIA81087.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
hypothetical protein; K09796 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1552_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2724..3671
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVM1_GRABC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHJ61985.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_cont_500_bf_scaffold_1552_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3661..4761
DNA (1101bp) protein (367aa)
TonB family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H7Y3_GLUDA
TonB family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1552_6
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4867..6234
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVK5_9PROT rbh
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49980.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1552_7
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6236..6547
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVK4_9PROT
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49979.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1552_8
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6572..7948
DNA (1377bp) protein (459aa)
Blr7582 protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4X1T2_9BURK rbh
Blr7582 protein {ECO:0000313|EMBL:BAO89965.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
Blr7582 protein rbh
SCNpilot_cont_500_bf_scaffold_1552_9
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7945..8802
DNA (858bp) protein (286aa)
citE; citrate lyase subunit beta (EC:4.1.3.6 4.1.3.34)
Citrate lyase subunit beta {ECO:0000313|EMBL:AGI74905.1}; EC=4.1.3.34 {ECO:0000313|EMBL:AGI74905.1};; EC=4.1.3.6 {ECO:0000313|EMBL:AGI74905.1};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
Citrate lyase subunit beta n=1 Tax=Octadecabacter arcticus 238 RepID=M9RYH9_9RHOB
SCNpilot_cont_500_bf_scaffold_1552_10
unknown

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comp(8812..8988)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1552_11
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9003..10412)
DNA (1410bp) protein (470aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Amidase n=1 Tax=Pseudomonas syringae pv. aceris str. M302273 RepID=F3JI42_PSESX rbh
Amidase {ECO:0000313|EMBL:EGH71515.1}; TaxID=629270 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. aceris str. M302273.;"
SCNpilot_cont_500_bf_scaffold_1552_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10496..11887)
DNA (1392bp) protein (464aa)
Amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037D0FC0
Amidase {ECO:0000313|EMBL:ETR76739.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_500_bf_scaffold_1552_13
unknown

Not on your lists

comp(11887..12072)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1552_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12084..13091)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000363F763 rbh
ABC transporter {ECO:0000313|EMBL:ETR76734.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1552_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..14148)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037BEDAD rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB94073.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1552_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14145..15056)
DNA (912bp) protein (304aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXX9_AZOC5
ABC transporter permease {ECO:0000313|EMBL:ETR76736.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_1552_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15071..16009)
DNA (939bp) protein (313aa)
Putative oligopeptide ABC transporter permease protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFV4_9BRAD
ABC transporter permease {ECO:0000313|EMBL:ETR76737.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative oligopeptide ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_1552_18
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16197..16904
DNA (708bp) protein (236aa)
isochorismatase hydrolase; K09020 ureidoacrylate peracid hydrolase [EC:3.5.1.110]
Isochorismatase hydrolase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VE99_SPHWW
Isochorismatase hydrolase {ECO:0000313|EMBL:AHY51835.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_cont_500_bf_scaffold_1552_19
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17032..18630
DNA (1599bp) protein (533aa)
ABC transporter substrate-binding protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FUS4_PELBH rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76740.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_1552_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18733..20001
DNA (1269bp) protein (423aa)
ABC transporter substrate-binding protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000287E20B
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76740.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
family 5 extracellular solute-binding protein
Displaying 20 items

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