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SCNpilot_cont_500_bf_scaffold_1586

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1586_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256..2025
DNA (1770bp) protein (590aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJA2_9PROT rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH12623.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative ABC transporter (fused ATP-binding and permease components); K02471 putative ATP-binding cassette transporter rbh
SCNpilot_cont_500_bf_scaffold_1586_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2353..2859
DNA (507bp) protein (169aa)
coxS; carbon monoxide dehydrogenase small subunit (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=3 Tax=Acidiphilium RepID=A5FUM2_ACICJ
Aldehyde dehydrogenase small subunit {ECO:0000313|EMBL:GAN76857.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1586_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2893..5274
DNA (2382bp) protein (794aa)
coxL; carbon monoxide dehydrogenase large subunit (EC:1.2.99.2) rbh
carbon-monoxide dehydrogenase n=1 Tax=Elioraea tepidiphila RepID=UPI00037109C6 rbh
Carbon monoxide dehydrogenase/molybdopterin binding aldehyde oxidase {ECO:0000313|EMBL:GAN76856.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1586_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5362..6156
DNA (795bp) protein (265aa)
coxM; carbon monoxide dehydrogenase medium subunit (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase (Acceptor) n=3 Tax=Acidiphilium RepID=A5FUM4_ACICJ
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:GAN76855.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1586_5
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

6329..6658
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KFH12584.1}; TaxID=943118 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" source="Toxoplasma gondii MAS.;"
SCNpilot_cont_500_bf_scaffold_1586_6
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6655..7518
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13FG8_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37171.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_500_bf_scaffold_1586_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7602..9179
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F55D7B
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:KFC64975.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1586_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9566..10678
DNA (1113bp) protein (371aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) rbh
Putative UDP-glucose 4-epimerase n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C6Q6_METED rbh
Dehydratase {ECO:0000313|EMBL:KGM31893.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_1586_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10675..11748
DNA (1074bp) protein (358aa)
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K12454 CDP-paratose 2-epimerase [EC:5.1.3.10] rbh
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000303484F rbh
CDP-paratose 2-epimerase {ECO:0000313|EMBL:KGM31892.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_1586_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11745..13043
DNA (1299bp) protein (433aa)
Radical SAM domain protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VZB8_METEP rbh
Radical SAM protein {ECO:0000313|EMBL:KGM31891.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
radical SAM domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1586_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13040..14128
DNA (1089bp) protein (363aa)
Putative glycosyltransferase, group 1 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AY27_AZOBR rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:AIB15420.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative glycosyltransferase, group 1 rbh
SCNpilot_cont_500_bf_scaffold_1586_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14130..15254
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE64_PHEZH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACG78497.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_500_bf_scaffold_1586_13
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15251..16339
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B71F1E rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN50890.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1586_14
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16343..16549
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C6Q0_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX21804.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_500_bf_scaffold_1586_15
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..17340
DNA (795bp) protein (265aa)
glycosyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B30B1F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78495.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_500_bf_scaffold_1586_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17393..18373
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HS50_CYAP4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1586_17
unknown

Not on your lists

comp(18486..18896)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1586_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19057..19710
DNA (654bp) protein (218aa)
Hypothetical transmembrane protein n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FND0_GLUOX
Lytic transglycosylase {ECO:0000313|EMBL:GAN76052.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1586_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19718..20044)
DNA (327bp) protein (109aa)
multidrug transporter n=1 Tax=Roseomonas sp. B5 RepID=UPI00030B12FC
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EFH09641.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
EamA-like transporter family
SCNpilot_cont_500_bf_scaffold_1586_20
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20059..21093)
DNA (1035bp) protein (345aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFH09640.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFH09640.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
glycosyltransferase; K01043 [EC:2.-.-.-]
Glycosyltransferase, group 2 family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSS6_9PROT rbh
SCNpilot_cont_500_bf_scaffold_1586_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21090..21803)
DNA (714bp) protein (238aa)
Methyltransferase domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A901_9PROT
Methyltransferase domain protein {ECO:0000313|EMBL:EHL95254.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
methyltransferase
SCNpilot_cont_500_bf_scaffold_1586_22
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22032..22970
DNA (939bp) protein (313aa)
Putative membrane protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSS3_9PROT
Putative membrane protein {ECO:0000313|EMBL:EFH09649.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
integral membrane protein; K15270 S-adenosylmethionine uptake transporter
SCNpilot_cont_500_bf_scaffold_1586_23
unknown

Not on your lists

23036..23251
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1586_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23495..24250)
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter, ATP-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9W2_AZOL4 rbh
branched-chain amino acid ABC transporter, ATP-binding component; K01995 branched-chain amino acid transport system ATP-binding protein rbh
Branched-chain amino acid ABC transporter, ATP-binding component {ECO:0000313|EMBL:CBS89202.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_1586_25
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24243..25175)
DNA (933bp) protein (311aa)
ABC transporter permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P0M9_AZOS1 rbh
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:BAI74208.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_1586_26
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25172..26095)
DNA (924bp) protein (308aa)
Branched-chain amino acid ABC transporter, permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZC92_AZOL4 rbh
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
Branched-chain amino acid ABC transporter, permease component {ECO:0000313|EMBL:CBS89200.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_1586_27
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26214..27401)
DNA (1188bp) protein (396aa)
Branched-chain amino acid ABC transporter, periplasmic substrate-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZC91_AZOL4 rbh
branched chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Branched-chain amino acid ABC transporter, periplasmic substrate-binding component {ECO:0000313|EMBL:CBS89199.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_1586_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27721..28704
DNA (984bp) protein (328aa)
Probable DNA repair protein HMPREF9946_04869 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7R2_9PROT rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ATP-dependent DNA ligase; K10979 DNA end-binding protein Ku
SCNpilot_cont_500_bf_scaffold_1586_29
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28825..29346)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW13_GRABC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI60989.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1586_30
unknown

Not on your lists

29563..29790
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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