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SCNpilot_cont_500_bf_scaffold_1595

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1595_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..749
DNA (747bp) protein (249aa)
bbsG1; (R)-benzylsuccinyl-CoA dehydrogenase BbsG (EC:1.3.99.21)
Acyl-CoA dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAK8_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1595_2
Selenomonas sp. oral taxon 892, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1131..1592
DNA (462bp) protein (154aa)
MaoC domain-containing protein dehydratase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
MaoC-like protein n=1 Tax=Selenomonas sp. oral taxon 892 str. F0426 RepID=U2KUA2_9FIRM
MaoC-like protein {ECO:0000313|EMBL:ERJ95877.1}; TaxID=1321786 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 892 str. F0426.;"
SCNpilot_cont_500_bf_scaffold_1595_3
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1585..3210
DNA (1626bp) protein (542aa)
Fe-S oxidoreductase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZYG9_9BRAD rbh
Fe-S oxidoreductase rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:BAM91495.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_1595_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3220..4620
DNA (1401bp) protein (467aa)
membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287A8B4
Uncharacterized protein {ECO:0000313|EMBL:KJC62761.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
membrane bound O-acyl transferase MBOAT family protein
SCNpilot_cont_500_bf_scaffold_1595_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4778..5278
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INL7_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69611.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_1595_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5570..6472)
DNA (903bp) protein (301aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRD2_GRABC
SCNpilot_cont_500_bf_scaffold_1595_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6712..7275
DNA (564bp) protein (188aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
petA; ubiquinol-Cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FC057D
SCNpilot_cont_500_bf_scaffold_1595_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7317..8585
DNA (1269bp) protein (423aa)
cytochrome B n=1 Tax=Elioraea tepidiphila RepID=UPI00035E7017
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
petB; Ubiquinol-cytochrome c reductase, Cytochrome b; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
SCNpilot_cont_500_bf_scaffold_1595_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8585..9364
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000317E4D9
Ubiquinol-cytochrome c reductase cytochrome c1 {ECO:0000313|EMBL:GAN76450.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fbcH; cytochrome c1, heme protein; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
SCNpilot_cont_500_bf_scaffold_1595_10
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9523..10254
DNA (732bp) protein (244aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
S-methyl-5'-thioadenosine phosphorylase n=2 Tax=Acidiphilium RepID=A5G2Q5_ACICJ
SCNpilot_cont_500_bf_scaffold_1595_11
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10286..10783
DNA (498bp) protein (166aa)
UPF0260 protein GDI1595/Gdia_1801 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=Y1595_GLUDA
hypothetical protein; K09160 hypothetical protein
UPF0260 protein GDI1595/Gdia_1801 {ECO:0000255|HAMAP-Rule:MF_00676}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1595_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11697
DNA (918bp) protein (306aa)
Dihydrodipicolinate synthase (EC:4.3.3.7)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003603A04 rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_500_bf_scaffold_1595_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11723..13717)
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003726302
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:KJC61167.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_500_bf_scaffold_1595_14
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13714..14112)
DNA (399bp) protein (133aa)
acyl-CoA hydrolase; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Acyl-CoA hydrolase n=1 Tax=Rhizobium sp. CF122 RepID=J2I689_9RHIZ
Acyl-CoA hydrolase {ECO:0000313|EMBL:EJL51415.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_cont_500_bf_scaffold_1595_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14397..15218
DNA (822bp) protein (274aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KE60_9PROT rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGM31340.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
enoyl-CoA hydratase rbh
SCNpilot_cont_500_bf_scaffold_1595_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15295..16221
DNA (927bp) protein (309aa)
Putative heat shock protein DnaJ n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASB0_AZOBR
putative heat shock protein DnaJ
Molecular chaperone DnaJ {ECO:0000313|EMBL:AIB13464.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCNpilot_cont_500_bf_scaffold_1595_17
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16221..16571
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000380ACD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR63922.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_1595_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17107..17802)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000379FAD6
Uncharacterized protein {ECO:0000313|EMBL:GAN77940.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1595_19
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17874..18704
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3B2_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL99148.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1595_20
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18752..19564
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003674CC2
Uncharacterized protein {ECO:0000313|EMBL:KKC26058.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
putative polysaccharide biosynthesis protein; K03328 polysaccharide transporter, PST family
Displaying 20 items

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