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SCNpilot_cont_500_bf_scaffold_1696

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1696_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1154
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000363B4E1
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:GAN77421.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_500_bf_scaffold_1696_2
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1331..3307
DNA (1977bp) protein (659aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CKZ5_9RHIZ
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EIZ84772.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
Response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal (fragment)
SCNpilot_cont_500_bf_scaffold_1696_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..3693)
DNA (309bp) protein (103aa)
Acetyltransferase, GNAT family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXC2_9PROT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM02371.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative acetyltransferase; K09181 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1696_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3638..5818)
DNA (2181bp) protein (727aa)
Putative acetyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1T0_ACIMA rbh
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:KDM67287.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
putative acetyltransferase; K09181 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1696_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5969..6928
DNA (960bp) protein (320aa)
Carboxylesterase Est2 family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4E3_9PROT rbh
Carboxylesterase Est2 family protein {ECO:0000313|EMBL:EHL98168.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
acetyl esterase
SCNpilot_cont_500_bf_scaffold_1696_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7145..7624)
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IP04_METNO
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACL60322.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_1696_7
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7766..8782
DNA (1017bp) protein (339aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K01505 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] rbh
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000255|HAMAP-Rule:MF_00807}; Short=ACC deaminase {ECO:0000255|HAMAP-Rule:MF_00807};; Short=ACCD {ECO:0000255|HAMAP-Rule:MF_00807};; EC=3.5.99.7 {ECO:0000255|HAMAP-Rule:MF_00807};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=1A1D_METNO rbh
SCNpilot_cont_500_bf_scaffold_1696_8
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9154..10095
DNA (942bp) protein (314aa)
Antigen n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT13_METAC
hypothetical protein
Antigen {ECO:0000313|EMBL:AKB80076.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
SCNpilot_cont_500_bf_scaffold_1696_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10101..11261
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QD84_RHOPT rbh
Permease {ECO:0000313|EMBL:KIZ43190.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1696_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11285..12628)
DNA (1344bp) protein (448aa)
2-polyprenylphenol 6-hydroxylase accessory protein ubiB n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV86_GRABC rbh
ABC transporter {ECO:0000313|EMBL:GAN76690.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
2-polyprenylphenol 6-hydroxylase rbh
SCNpilot_cont_500_bf_scaffold_1696_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12631..13116)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWD6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35702.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1696_12
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13119..14906)
DNA (1788bp) protein (596aa)
oligoendopeptidase F (EC:3.4.24.-); K08602 oligoendopeptidase F [EC:3.4.24.-] rbh
Oligoendopeptidase F {ECO:0000313|EMBL:ABI61265.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABI61265.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Oligoendopeptidase F n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV87_GRABC rbh
SCNpilot_cont_500_bf_scaffold_1696_13
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15045..16712
DNA (1668bp) protein (556aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035C905A rbh
AMP-binding enzyme {ECO:0000313|EMBL:EHM00877.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_1696_14
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16912..17769)
DNA (858bp) protein (286aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured alpha proteobacterium HF0070_14E07 RepID=E0XS54_9PROT
oxidoreductase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_cont_500_bf_scaffold_1696_15
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18109..20604
DNA (2496bp) protein (832aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] rbh
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Phosphorylase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4J2_STAND rbh
SCNpilot_cont_500_bf_scaffold_1696_16
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20871..23021
DNA (2151bp) protein (717aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] rbh
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM
glycogen branching protein n=1 Tax=Xanthobacteraceae RepID=UPI00037403FD rbh
SCNpilot_cont_500_bf_scaffold_1696_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23018..24283
DNA (1266bp) protein (422aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
glucose-1-phosphate adenylyltransferase n=1 Tax=Methylocystis parvus RepID=UPI0002D8F4B3
SCNpilot_cont_500_bf_scaffold_1696_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24294..25751
DNA (1458bp) protein (486aa)
glycogen synthase; K00703 starch synthase [EC:2.4.1.21] rbh
Glycogen synthase {ECO:0000255|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000255|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000255|HAMAP-Rule:MF_00484}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E50419 rbh
SCNpilot_cont_500_bf_scaffold_1696_19
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25748..29911
DNA (4164bp) protein (1388aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Glycogen debranching enzyme GlgX n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4I8_STAND rbh
SCNpilot_cont_500_bf_scaffold_1696_20
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30302..33169)
DNA (2868bp) protein (956aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] rbh
Glycine dehydrogenase (decarboxylating) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSU6_9PROT rbh
SCNpilot_cont_500_bf_scaffold_1696_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33172..33558)
DNA (387bp) protein (129aa)
Glycine cleavage system H protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUZ6_AZOS1
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_1696_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33574..34737)
DNA (1164bp) protein (388aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003764D4A
SCNpilot_cont_500_bf_scaffold_1696_23
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35167..35850)
DNA (684bp) protein (228aa)
Glutathione S-transferase domain n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHS6_BEII9
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ACB95969.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_1696_24
unknown

Not on your lists

36125..37369
DNA (1245bp) protein (415aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1696_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37528..38835
DNA (1308bp) protein (436aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1]
type II citrate synthase n=1 Tax=Elioraea tepidiphila RepID=UPI00037E488A
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1696_26
unknown

Not on your lists

38870..39013
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1696_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39255..39881
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036427AF
Uncharacterized protein {ECO:0000313|EMBL:EFH09977.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_500_bf_scaffold_1696_28
unknown

Not on your lists

40131..41066
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1696_29
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41104..41520
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QF51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFG69820.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1696_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41541..42062
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IN42_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 1-30 of 38 in total

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