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SCNpilot_cont_500_bf_scaffold_1751

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1751_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..456)
DNA (456bp) protein (152aa)
Putative methyl-accepting chemotaxis receptor/sensory transducer n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDS1_AZOL4
Putative methyl-accepting chemotaxis receptor/sensory transducer
Putative methyl-accepting chemotaxis receptor/sensory transducer {ECO:0000313|EMBL:CBS89701.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_1751_2
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

700..1563
DNA (864bp) protein (288aa)
Aldose 1-epimerase n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QCW7_GLUHA
Uncharacterized protein {ECO:0000313|EMBL:KJR64860.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1751_3
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1667..2293
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003751D09
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABI56161.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SCNpilot_cont_500_bf_scaffold_1751_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2469..2630
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00035F0AF5
Uncharacterized protein {ECO:0000313|EMBL:KGM32204.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_1751_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2715..4106
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EFD7A7 rbh
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:EHL96553.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative peptidase M20 rbh
SCNpilot_cont_500_bf_scaffold_1751_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4255..6015)
DNA (1761bp) protein (587aa)
poly-beta-hydroxybutyrate polymerase domain-containing protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003669102 rbh
Poly-beta-hydroxybutyrate polymerase/poly(3-hydroxyalkanoate) polymerase {ECO:0000313|EMBL:GAN76550.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1751_7
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6091..7452)
DNA (1362bp) protein (454aa)
Mn2+/Fe2+ transporter, NRAMP family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13HI6_BURXL rbh
Mn2+/Fe2+ transporter rbh
Mn2+/Fe2+ transporter, NRAMP family {ECO:0000313|EMBL:ABE36453.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_500_bf_scaffold_1751_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7539..7952)
DNA (414bp) protein (138aa)
Histidine kinase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBU0_9RHIZ
Histidine kinase {ECO:0000313|EMBL:AHB48341.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
response regulator receiver protein
SCNpilot_cont_500_bf_scaffold_1751_9
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8324..8731
DNA (408bp) protein (136aa)
Aspartate racemase {ECO:0000313|EMBL:EFH09891.1}; EC=5.1.1.13 {ECO:0000313|EMBL:EFH09891.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
aspartate racemase family protein 2 (EC:5.1.1.-); K01779 aspartate racemase [EC:5.1.1.13]
glutamate racemase n=1 Tax=Roseomonas sp. B5 RepID=UPI000305D7D0
SCNpilot_cont_500_bf_scaffold_1751_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9182..10252
DNA (1071bp) protein (357aa)
N5,N10-methylenetetrahydromethanopterin reductase protein n=1 Tax=uncultured bacterium CSL144 RepID=G4WVR2_9BACT
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_500_bf_scaffold_1751_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10252..11649
DNA (1398bp) protein (466aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q12ZY0_RHOPS
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE41609.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_1751_12
unknown

Not on your lists

11992..12198
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1751_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12326..12988)
DNA (663bp) protein (221aa)
Hydrolase, NUDIX family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT54_9PROT
Phosphohydrolase/NUDIX hydrolase {ECO:0000313|EMBL:GAN76035.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
NUDIX family hydrolase
SCNpilot_cont_500_bf_scaffold_1751_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12981..13805)
DNA (825bp) protein (275aa)
Nitroreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA3_9PROT
Nitroreductase {ECO:0000313|EMBL:EDP65568.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
nitroreductase
SCNpilot_cont_500_bf_scaffold_1751_15
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13893..14957
DNA (1065bp) protein (355aa)
Malate/L-lactate dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JG3_MESSB rbh
malate/L-lactate dehydrogenase rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ABG62462.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1751_16
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15370..16539
DNA (1170bp) protein (390aa)
Serine/threonine protein kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHX5_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KEZ20382.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
serine/threonine protein kinase
SCNpilot_cont_500_bf_scaffold_1751_17
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17608)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HBQ3_9RHOB rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Roseovarius_63_250
SCNpilot_cont_500_bf_scaffold_1751_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17669..18775)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036AD608 rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:KGM33185.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
mandelate racemase/muconate lactonizing protein
SCNpilot_cont_500_bf_scaffold_1751_19
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18879..19304)
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
twitching motility protein PilT n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003170F88
PilT domain-containing protein; K07062
SCNpilot_cont_500_bf_scaffold_1751_20

Not on your lists

comp(19301..19603)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FKH4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN58120.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1751_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19678..20844)
DNA (1167bp) protein (389aa)
(S)-mandelate dehydrogenase n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FBA0_9ALTE rbh
L-lactate dehydrogenase {ECO:0000313|EMBL:ETR78167.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
mdlB; (S)-mandelate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1751_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20861..22048)
DNA (1188bp) protein (396aa)
(S)-mandelate dehydrogenase n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FBA0_9ALTE
L-lactate dehydrogenase {ECO:0000313|EMBL:ETR78167.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
mdlB; (S)-mandelate dehydrogenase
SCNpilot_cont_500_bf_scaffold_1751_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22111..22476)
DNA (366bp) protein (122aa)
hypothetical protein; K10253 DOPA 4,5-dioxygenase [EC:1.14.99.-]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SLE1_9BRAD
DOPA 4,5-dioxygenase {ECO:0000313|EMBL:GAN77782.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1751_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22586..23659
DNA (1074bp) protein (358aa)
NADP-dependent alcohol dehydrogenase n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003796FC4 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIZ33765.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Alcohol dehydrogenase; NAD(P) and Zinc binding rbh
SCNpilot_cont_500_bf_scaffold_1751_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23799..25295)
DNA (1497bp) protein (499aa)
fadD; long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
Acyl-CoA synthetase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UCX1_9BURK
Fatty-acid--CoA ligase/acyl-CoA synthetase {ECO:0000313|EMBL:GAN77541.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1751_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25783..26109)
DNA (327bp) protein (109aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Putative 3-ketoacyl-CoA thiolase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJM0_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1751_27
unknown

Not on your lists

26542..27000
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1751_28
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27062..27556
DNA (495bp) protein (165aa)
Putative cytosine/adenosine deaminase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCG9_9SPHN
Putative cytosine/adenosine deaminase {ECO:0000313|EMBL:EAT08586.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
putative cytidine/deoxycytidylate deaminase
SCNpilot_cont_500_bf_scaffold_1751_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27773..28525)
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0V4_9PROT
Oxidoreductase/short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAN78447.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
short-chain dehydrogenase/reductase sdr
SCNpilot_cont_500_bf_scaffold_1751_30
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28522..29691)
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y0R8_9RHOO rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENO85105.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
acyl-CoA dehydrogenase rbh
Displaying items 1-30 of 57 in total

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