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SCNpilot_cont_500_bf_scaffold_1837

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1837_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(261..461)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07R74_RHOP5
hypothetical protein
Integrase {ECO:0000313|EMBL:KIZ38002.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_500_bf_scaffold_1837_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(583..1482)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX11_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:GAN76012.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1837_3
unknown

Not on your lists

comp(1466..2053)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1837_4
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2050..2820)
DNA (771bp) protein (257aa)
Class II Aldolase and Adducin domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQC1_9PROT rbh
Class II Aldolase and Adducin domain protein {ECO:0000313|EMBL:EFH10491.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1837_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2904..4151
DNA (1248bp) protein (416aa)
N-carbamoyl-L-amino acid hydrolase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] rbh
Putative N-carbamyl-L-cysteine amidohydrolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6A7_9PROT rbh
Putative N-carbamyl-L-cysteine amidohydrolase {ECO:0000313|EMBL:EHL97209.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_1837_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4325..4909)
DNA (585bp) protein (195aa)
Membrane protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QHI3_PSECO
Membrane protein {ECO:0000313|EMBL:KIZ35674.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
outer membrane protein
SCNpilot_cont_500_bf_scaffold_1837_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5079..5447
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NST2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33407.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_1837_8
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5595..6764
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YTK7_9BURK rbh
alcohol dehydrogenase GroES domain-containing protein rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADX58732.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
SCNpilot_cont_500_bf_scaffold_1837_9
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6761..7789
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RSN9_9BRAD
Aldehyde-activating protein {ECO:0000313|EMBL:KJR66436.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1837_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8094..8699
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQ90_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95177.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_cont_500_bf_scaffold_1837_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8751..9908
DNA (1158bp) protein (386aa)
hemolysin secretion protein D n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037AA215
Hemolysin secretion protein D {ECO:0000313|EMBL:KJC47210.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative multidrag resistance protein
SCNpilot_cont_500_bf_scaffold_1837_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9927..13088
DNA (3162bp) protein (1054aa)
transporter n=1 Tax=Afipia birgiae RepID=UPI0002E295D2
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS41657.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_cont_500_bf_scaffold_1837_13
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13102..15450
DNA (2349bp) protein (783aa)
Carbohydrate-binding family V/XII n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EN50_9BURK rbh
Carbohydrate-binding family V/XII {ECO:0000313|EMBL:KDP84515.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
carbohydrate-binding family V/XII rbh
SCNpilot_cont_500_bf_scaffold_1837_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15491..16087
DNA (597bp) protein (199aa)
Putative exported protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJ46_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIB11466.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1837_15
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16094..16801
DNA (708bp) protein (236aa)
Ion transport 2 domain protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TXH6_MARPU
Uncharacterized protein {ECO:0000313|EMBL:AHF04684.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
ion transport 2 domain protein
SCNpilot_cont_500_bf_scaffold_1837_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16806..17942
DNA (1137bp) protein (379aa)
Paraquat-inducible membrane protein A n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZF24_AZOL4
Paraquat-inducible protein A {ECO:0000313|EMBL:GAN76483.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
pqiA; paraquat-inducible membrane protein A; K03808 paraquat-inducible protein A
SCNpilot_cont_500_bf_scaffold_1837_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17939..19630
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037022BD
Uncharacterized protein {ECO:0000313|EMBL:KGM35049.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
paraquat-inducible protein B; K06192 paraquat-inducible protein B
SCNpilot_cont_500_bf_scaffold_1837_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19627..20181
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVR3_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN76481.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K09857 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1837_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20201..20944
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JNH9_BURP8
Uncharacterized protein {ECO:0000313|EMBL:GAN75855.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1837_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21062..22183)
DNA (1122bp) protein (374aa)
FAD dependent oxidoreductase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09D56_STIAD
fad dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:EAU69666.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCNpilot_cont_500_bf_scaffold_1837_21
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22419..23816)
DNA (1398bp) protein (466aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] rbh
Trehalose 6-phosphate synthase {ECO:0000313|EMBL:ABQ30084.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABQ30084.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Trehalose 6-phosphate synthase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWV2_ACICJ rbh
SCNpilot_cont_500_bf_scaffold_1837_22
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24020..24976
DNA (957bp) protein (319aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase {ECO:0000313|EMBL:AHJ62250.1}; EC=2.4.1.- {ECO:0000313|EMBL:AHJ62250.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Glycosyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUX6_GRABC
SCNpilot_cont_500_bf_scaffold_1837_23
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25142..25912)
DNA (771bp) protein (257aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EPY01992.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EPY01992.1};; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
Enoyl-CoA hydratase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S7X4_PHAFV
enoyl-CoA hydratase/isomerase
SCNpilot_cont_500_bf_scaffold_1837_24
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25940..27154)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNB7_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37303.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Displaying 24 items

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