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SCNpilot_cont_500_bf_scaffold_1940

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1940_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..692
DNA (690bp) protein (230aa)
UPF0317 protein BRAS3809_7890014 n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TBB9_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1940_2
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

793..1773
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Fischerella sp. JSC-11 RepID=G6FYH0_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EHC09747.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1940_3
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1898..3916
DNA (2019bp) protein (673aa)
N-methylhydantoinase A; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase n=1 Tax=Citreicella sp. SE45 RepID=D0D910_9RHOB rbh
5-oxoprolinase {ECO:0000313|EMBL:EEX13127.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
SCNpilot_cont_500_bf_scaffold_1940_4
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3913..5544
DNA (1632bp) protein (544aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
5-oxoprolinase n=1 Tax=Citreicella sp. SE45 RepID=D0D909_9RHOB rbh
5-oxoprolinase {ECO:0000313|EMBL:EEX13459.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
SCNpilot_cont_500_bf_scaffold_1940_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5753..6811
DNA (1059bp) protein (353aa)
Cytochrome c class I n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JF49_HYPSM
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:CCB65404.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_1940_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..8272
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00038078C8 rbh
proline/betaine transporter 2 rbh
Putative proline/betaine transporter 2 {ECO:0000313|EMBL:BAF87029.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1940_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8266..8796
DNA (531bp) protein (177aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DC188F
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:KKB77167.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07006
SCNpilot_cont_500_bf_scaffold_1940_8
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8818..10278)
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVP0_GRABC
Uncharacterized protein {ECO:0000313|EMBL:AHJ61964.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1940_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10542..12236
DNA (1695bp) protein (565aa)
hypothetical protein; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003774C40 rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_500_bf_scaffold_1940_10
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12440..13894
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003652023
hypothetical protein
Glycoside hydrolase family 5 {ECO:0000313|EMBL:ACA16017.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_1940_11
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14070..14693)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SGD8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD93265.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
DSBA oxidoreductase
SCNpilot_cont_500_bf_scaffold_1940_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14737..16005)
DNA (1269bp) protein (423aa)
Transporter, major facilitator family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHY1_9PROT rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFH13085.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
qacA; MFS family transporter
SCNpilot_cont_500_bf_scaffold_1940_13
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16251..17273
DNA (1023bp) protein (341aa)
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RTP5_9PROT
Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:EFH09324.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
family 3 extracellular solute-binding protein; K09969 general L-amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1940_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17436..18356
DNA (921bp) protein (307aa)
Retroviral aspartyl protease n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4M1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN77341.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_1940_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18438..19448
DNA (1011bp) protein (337aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D0BCA
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:GAN78346.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1940_16
bacterium YEK0313, Bacteria

Not on your lists

19635..21485
DNA (1851bp) protein (617aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E79106 rbh
Sialic acid TRAP transporter permease protein SiaT {ECO:0000313|EMBL:CEJ16294.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins (dctQ/dctM domains)
SCNpilot_cont_500_bf_scaffold_1940_17
unknown

Not on your lists

comp(21676..22020)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1940_18
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22383..23306)
DNA (924bp) protein (308aa)
Segregation and condensation protein B n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQ24_9PROT
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
scpB; chromosome segregation and condensation protein B; K06024 segregation and condensation protein B
SCNpilot_cont_500_bf_scaffold_1940_19
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23303..24100)
DNA (798bp) protein (266aa)
Segregation and condensation protein ScpA n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSP8_GRABC rbh
Segregation and condensation protein ScpA {ECO:0000313|EMBL:AHJ63061.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
segregation and condensation protein ScpA; K05896 segregation and condensation protein A rbh
SCNpilot_cont_500_bf_scaffold_1940_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24078..24809)
DNA (732bp) protein (244aa)
Peptidase, M50 family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVP4_9PROT
Peptidase M50 {ECO:0000313|EMBL:GAN78044.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
peptidase M50
SCNpilot_cont_500_bf_scaffold_1940_21
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24815..25807)
DNA (993bp) protein (331aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] rbh
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Beta-N-acetylhexosaminidase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FX37_ACICJ rbh
SCNpilot_cont_500_bf_scaffold_1940_22
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26090..26947)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSP5_GRABC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI62157.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1940_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27029..28813)
DNA (1785bp) protein (595aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] rbh
arginyl-tRNA synthetase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FACECB rbh
SCNpilot_cont_500_bf_scaffold_1940_24
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28920..29237)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZDE4_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI50377.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1940_25
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29440..29889)
DNA (450bp) protein (150aa)
TenA family transcriptional regulator; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
TenA family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VG94_9SPHN
TenA family transcriptional regulator {ECO:0000313|EMBL:EZP83661.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
SCNpilot_cont_500_bf_scaffold_1940_26
unknown

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comp(29974..30390)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1940_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30593..32071
DNA (1479bp) protein (493aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EFH11507.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EFH11507.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RME1_9PROT rbh
Displaying 27 items

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