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SCNpilot_cont_500_bf_scaffold_8173

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8173_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..3075)
DNA (3075bp) protein (1025aa)
sarcosine oxidase subunit alpha family; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Sarcosine oxidase, alpha subunit family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A753_STAND
Sarcosine oxidase, alpha subunit family {ECO:0000313|EMBL:ADH90284.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_8173_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3072..3344)
DNA (273bp) protein (91aa)
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
Sarcosine oxidase, delta subunit family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A752_STAND
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:ADH90283.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_8173_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3344..4633)
DNA (1290bp) protein (430aa)
soxB; sarcosine oxidase beta subunit (EC:1.5.3.1); K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]
Sarcosine oxidase subunit beta n=1 Tax=Nitratireductor indicus C115 RepID=K2PMY6_9RHIZ
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EKF42442.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_8173_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5311..5787
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RS7_GRABC
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
SCNpilot_cont_500_bf_scaffold_8173_5
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5873..6307
DNA (435bp) protein (145aa)
tufB; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Elongation factor Tu n=2 Tax=Phaeospirillum RepID=H8FNC6_PHAMO
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Displaying 5 items

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