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SCNpilot_cont_500_bf_scaffold_3262

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3262_1
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..433)
DNA (432bp) protein (144aa)
CDP-diacylglycerol diphosphatase (EC:3.6.1.26); K01521 CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
CDP-diacylglycerol pyrophosphatase n=1 Tax=gamma proteobacterium WG36 RepID=UPI000368629F
CDP-diacylglycerol diphosphatase {ECO:0000313|EMBL:KDR26022.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
SCNpilot_cont_500_bf_scaffold_3262_2
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

631..1854
DNA (1224bp) protein (408aa)
Cytochrome c3 hydrogenase alpha (Or beta) chain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ21_9GAMM rbh
Cytochrome c3 hydrogenase alpha (Or beta) chain {ECO:0000313|EMBL:EAR22176.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
4Fe-4S ferredoxin rbh
SCNpilot_cont_500_bf_scaffold_3262_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2134..2310
DNA (177bp) protein (59aa)
Cyclic nucleotide-binding n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U464_9PROT
Cyclic nucleotide-binding {ECO:0000313|EMBL:CAM77671.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
SCNpilot_cont_500_bf_scaffold_3262_4
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2313..3164
DNA (852bp) protein (284aa)
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQS0_9PROT rbh
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:EKV30776.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_3262_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3169..3951
DNA (783bp) protein (261aa)
oxidoreductase n=1 Tax=Methylocystis parvus RepID=UPI00035F6470 rbh
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:ACY49462.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
SCNpilot_cont_500_bf_scaffold_3262_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3941..5245
DNA (1305bp) protein (435aa)
Nickel-dependent hydrogenase large subunit n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QFF8_METSZ rbh
Nickel-dependent hydrogenase large subunit rbh
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:CCJ06296.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_3262_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5279..5722
DNA (444bp) protein (148aa)
hydrogenase maturation protease n=1 Tax=Methylocystis rosea RepID=UPI0003782BDA
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:CCJ06295.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_3262_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5784..6797)
DNA (1014bp) protein (338aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FVC4_ACICJ
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_500_bf_scaffold_3262_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6788..9217)
DNA (2430bp) protein (810aa)
hydrogenase maturation protein HypF n=1 Tax=Methylococcus capsulatus RepID=UPI0003603A2D rbh
hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF
Tax=RBG_16_Gamma2_65_34_curated
SCNpilot_cont_500_bf_scaffold_3262_10
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9298..10395)
DNA (1098bp) protein (366aa)
Protein required for maturation of hydrogenases n=1 Tax=mine drainage metagenome RepID=E6QTH5_9ZZZZ
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KFZ89737.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hydrogenase formation HypD protein; K04654 hydrogenase expression/formation protein HypD
SCNpilot_cont_500_bf_scaffold_3262_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10456..11172)
DNA (717bp) protein (239aa)
hydrogenase nickel incorporation protein HypB n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035DAFFE
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_500_bf_scaffold_3262_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11165..11503)
DNA (339bp) protein (113aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Thiocapsa marina 5811 RepID=F9UCG6_9GAMM
putative hydrogenase nickel incorporation protein hypA; K04651 hydrogenase nickel incorporation protein HypA/HybF
Tax=RBG_16_Gamma2_65_34_curated
SCNpilot_cont_500_bf_scaffold_3262_13
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11496..11819)
DNA (324bp) protein (108aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YYY6_9GAMM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:EIC21913.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hydrogenase assembly chaperone HypC/HupF
SCNpilot_cont_500_bf_scaffold_3262_14
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11831..13054
DNA (1224bp) protein (408aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037EA0BE
Dihydropyrimidinase {ECO:0000313|EMBL:ACA16983.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_3262_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13023..13235
DNA (213bp) protein (71aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2]
dihydropyrimidinase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035FBE51
Dihydropyrimidinase {ECO:0000313|EMBL:ACA16983.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_3262_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13441..13848
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372EB9D
Uncharacterized protein {ECO:0000313|EMBL:EJW10767.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3262_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13919..14719
DNA (801bp) protein (267aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YN06_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:KGM34058.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldo/keto reductase
Displaying 17 items

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