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SCNpilot_cont_500_bf_scaffold_3270

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3270_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(252..1961)
DNA (1710bp) protein (570aa)
Putative hydrolase, CocE/NonD family n=1 Tax=Acidovorax sp. CF316 RepID=J0U231_9BURK
X-Pro dipeptidyl-peptidase domain-containing protein; K06978
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_500_bf_scaffold_3270_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2208..2948)
DNA (741bp) protein (247aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. H160 RepID=B5WJW9_9BURK rbh
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_cont_500_bf_scaffold_3270_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3009..3638)
DNA (630bp) protein (210aa)
L-fuculose phosphate aldolase; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
Blr3542 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89PE0_BRADU
Putative L-fuculose phosphate aldolase {ECO:0000313|EMBL:KGJ69079.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_500_bf_scaffold_3270_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3635..4687)
DNA (1053bp) protein (351aa)
Alcohol dehydrogenase id=4253857 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_3270_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4798..6015)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZU6_AZOBR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD03455.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_500_bf_scaffold_3270_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6168..7013)
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
Pantothenate synthetase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0V8_9PROT rbh
SCNpilot_cont_500_bf_scaffold_3270_7
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7086..7832
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T6D7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY91732.1}; TaxID=1335757 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter sp. UAH-SP71.;"
SCNpilot_cont_500_bf_scaffold_3270_8
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7967..9616
DNA (1650bp) protein (550aa)
Transporter n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTT0_GRABC
transporter; K16013 ATP-binding cassette, subfamily C, bacterial CydD
Transporter {ECO:0000313|EMBL:ABI61772.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_3270_9
unknown

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9613..9846
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3270_10
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9843..11474
DNA (1632bp) protein (544aa)
ABC transporter ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTS9_GRABC rbh
ABC transporter ATP-binding protein; K16012 ATP-binding cassette, subfamily C, bacterial CydC rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABI61773.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_3270_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11560..12465
DNA (906bp) protein (302aa)
Polysaccharide deacetylase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV4_ROSLO
Chitin deacetylase {ECO:0000313|EMBL:KJC54109.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
polysaccharide deacetylase
Displaying 11 items

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