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SCNpilot_cont_500_bf_scaffold_3668

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3668_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121..924
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003774583
Uncharacterized protein {ECO:0000313|EMBL:EIK88927.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3668_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

984..1871
DNA (888bp) protein (296aa)
Cation diffusion facilitator family transporter n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3M0_9PROT
Cation efflux protein {ECO:0000313|EMBL:GAN78376.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
cation diffusion facilitator family transporter rbh
SCNpilot_cont_500_bf_scaffold_3668_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1906..2451
DNA (546bp) protein (182aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A849_9PROT
Cobalamin adenosyltransferase {ECO:0000313|EMBL:GAN78477.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ATP:cob(I)alamin adenosyltransferase
SCNpilot_cont_500_bf_scaffold_3668_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2920..4005
DNA (1086bp) protein (362aa)
Glycosyl transferase, group 1 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TRE8_9BRAD
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CCE09036.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
group 1 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_3668_5
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4182..6680)
DNA (2499bp) protein (833aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J194_ACIMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ79476.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_3668_6
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6673..8130)
DNA (1458bp) protein (486aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B48D9C
Uncharacterized protein {ECO:0000313|EMBL:KGE04866.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3668_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8166..9050)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S916_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78220.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3668_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9125..9466)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RL87_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78219.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_3668_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9432..9926)
DNA (495bp) protein (165aa)
Flagellar protein FlbT (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RTC4_9PROT
Flagellar biosynthesis regulator FlbT {ECO:0000313|EMBL:GAN78218.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flbT; putative flagellar FlbT; K06601 flagellar protein FlbT
SCNpilot_cont_500_bf_scaffold_3668_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10173..10475)
DNA (303bp) protein (101aa)
flagellin n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B755EE
Flagellin domain-containing protein {ECO:0000313|EMBL:GAN78217.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellin domain-containing protein
SCNpilot_cont_500_bf_scaffold_3668_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10445..10969)
DNA (525bp) protein (175aa)
flagellin n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B52EDF
Flagellin domain-containing protein {ECO:0000313|EMBL:GAN78217.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellin; K02406 flagellin
SCNpilot_cont_500_bf_scaffold_3668_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11079..12167)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035EFD33
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:GAN78216.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K02397 flagellar hook-associated protein 3 FlgL
SCNpilot_cont_500_bf_scaffold_3668_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12184..13710)
DNA (1527bp) protein (509aa)
Flagellar hook-associated protein 1 FlgK n=1 Tax=Gluconobacter oxydans H24 RepID=K7SKP0_GLUOY rbh
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:GAN78215.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellar hook-associated protein 1 FlgK rbh
SCNpilot_cont_500_bf_scaffold_3668_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13737..15005)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E59E63
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAN78214.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
SCNpilot_cont_500_bf_scaffold_3668_15
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15411..17087
DNA (1677bp) protein (559aa)
Peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HF88_9BRAD
Flagellar hook-length control protein {ECO:0000313|EMBL:EHR05404.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
flagellar hook-length control protein
SCNpilot_cont_500_bf_scaffold_3668_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17105..17791
DNA (687bp) protein (229aa)
Flagellar hook capping protein n=3 Tax=Acidiphilium RepID=A5FUQ9_ACICJ
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
Flagellar hook capping protein {ECO:0000313|EMBL:ABQ29341.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_3668_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17953..18237
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036B2348
Uncharacterized protein {ECO:0000313|EMBL:EHL99506.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3668_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18313..19149)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000371D7FE
short-chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_cont_500_bf_scaffold_3668_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19210..19542)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKV7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH12052.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3668_20
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19784..20785)
DNA (1002bp) protein (334aa)
alkane 1-monooxygenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D64957
Alkane 1-monooxygenase {ECO:0000313|EMBL:ESY93450.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
luciferase family oxidoreductase, group 1
SCNpilot_cont_500_bf_scaffold_3668_21
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20829..21806
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037A257F rbh
Putative C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:EAS49168.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
C4-dicarboxylate transporter/malic acid transport protein; K03304 tellurite resistance/dicarboxylate transporter, TDT family rbh
SCNpilot_cont_500_bf_scaffold_3668_22
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21861..22634)
DNA (774bp) protein (258aa)
Putative metallophosphoesterase (Ser/Thr-specific protein phosphatase or nuclease) probable IS n=1 Tax=Rhizobium sp. RepID=L0NGT9_RHISP rbh
Putative metallophosphoesterase (Ser/Thr-specific protein phosphatase or nuclease) probable IS {ECO:0000313|EMBL:CCF20313.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
putative phosphoesterase, ICC rbh
SCNpilot_cont_500_bf_scaffold_3668_23
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22650..23627)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPG0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM34331.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3668_24
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23913..24485
DNA (573bp) protein (191aa)
Cobalt-zinc-cadmium resistance protein czcD n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BR38_GRABC
Cobalt-zinc-cadmium resistance protein czcD {ECO:0000313|EMBL:AHJ63688.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
cobalt-zinc-cadmium resistance protein czcD
SCNpilot_cont_500_bf_scaffold_3668_25
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24555..24785
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YIF4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS40360.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
SCNpilot_cont_500_bf_scaffold_3668_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24922..25284
DNA (363bp) protein (121aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGB7_METS4
4Fe-4S ferredoxin {ECO:0000313|EMBL:KJB94433.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit
Displaying 26 items

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